Resource

Id Histone_ChIP-seq/ENCSR374XINcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR374XIN [biosample_summary="Homo sapiens suprapubic skin tissue male adult (37 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR374XIN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0036149/
  • biosample_summary: Homo sapiens suprapubic skin tissue male adult (37 years)
  • date_created: 2019-07-29T21:17:06.940563+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR374XIN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR374XIN float

Histone_ChIP-seq_ENCSR374XIN
Histone_ChIP-seq ENCSR374XIN [biosample_summary="Homo sapiens suprapubic skin tissue male adult (37 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR374XIN [1.31, 13.4]
n
152,083,413
mean
4.77
sd
1.65

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1520834134.73% 136706
chr1 15932921 6.40% 13609
chr2 12121062 5.00% 11307
chr3 9814085 4.95% 9145
chr4 5653911 2.97% 5659
chr5 7532555 4.15% 7165
chr6 8393621 4.91% 8081
chr7 6660313 4.18% 6433
chr8 6153168 4.24% 5934
chr9 6971594 5.04% 6123
chr10 7868813 5.88% 7038
chr11 8495524 6.29% 7273
chr12 7547169 5.66% 6703
chr13 3267980 2.86% 3251
chr14 5283801 4.94% 4468
chr15 5510651 5.40% 4847
chr16 5766858 6.38% 4949
chr17 8420304 10.11% 6561
chr18 2790649 3.47% 2809
chr19 6240224 10.65% 4885
chr20 4567777 7.09% 3956
chr21 1946691 4.17% 1827
chr22 3952474 7.78% 3208
chrX 1171376 0.75% 1440
chrY 19892 0.03% 35
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 136706 215 66005 1112.49 792
global segment-length histogram

Files

Filename Size md5
ENCFF904DTJ.bed.gz 2.9 MB 6ecf0eea77bf48974b8fe4146bb4ff98
ENCFF904DTJ.tabix.bed.gz 1.39 MB 56ca14f202d0b41e5747f64b66867af7
ENCFF904DTJ.tabix.bed.gz.tbi 332.57 KB 7996effb6fe163a3817789403d0576d9
genomic_resource.yaml 1.51 KB eb72f906c9acfdd1ecc85d5d69ee28e3
statistics/