Resource

Id Histone_ChIP-seq/ENCSR374RZRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR374RZR [biosample_summary="Homo sapiens MCF-7" and target="H3K9me2"]
Description
Labels
  • accession: ENCSR374RZR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001203/
  • biosample_summary: Homo sapiens MCF-7
  • date_created: 2016-10-07T21:30:34.726697+00:00
  • date_released: 2017-01-13
  • doi: 10.17989/ENCSR374RZR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR374RZR float

Histone_ChIP-seq_ENCSR374RZR
Histone_ChIP-seq ENCSR374RZR [biosample_summary="Homo sapiens MCF-7" and target="H3K9me2"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR374RZR [1.41, 5]
n
393,726
mean
2.83
sd
0.79

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3937260.01% 887
chr1 24200 0.01% 48
chr2 20430 0.01% 53
chr3 55731 0.03% 135
chr4 4163 <0.01% 11
chr5 25930 0.01% 74
chr6 12013 0.01% 32
chr7 20781 0.01% 53
chr8 30937 0.02% 81
chr9 10351 0.01% 26
chr10 6364 <0.01% 17
chr11 2479 <0.01% 7
chr12 14744 0.01% 40
chr13 5862 0.01% 12
chr14 16388 0.02% 44
chr15 9309 0.01% 23
chr16 4917 0.01% 14
chr17 48299 0.06% 82
chr18 414 <0.01% 1
chr19 1002 <0.01% 3
chr20 75339 0.12% 121
chr21 2314 <0.01% 6
chrX 1759 <0.01% 4
3344 contigs with no values (237122968 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 887 208 1753 443.89 386
global segment-length histogram

Files

Filename Size md5
ENCFF538BHD.bed.gz 21.56 KB d338de459a8be8a24dabface9ec8efc3
ENCFF538BHD.tabix.bed.gz 9.95 KB e660c6d69e08ce87e389a0d8dd45b458
ENCFF538BHD.tabix.bed.gz.tbi 12.28 KB 559e4b087eae5d01e2b471dd01579197
genomic_resource.yaml 2.61 KB eb53518588c08d58632fdf0d0a64316b
statistics/