Resource

Id Histone_ChIP-seq/ENCSR370RJPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR370RJP [biosample_summary="Homo sapiens endocrine pancreas tissue male adult (46 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR370RJP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000016/
  • biosample_summary: Homo sapiens endocrine pancreas tissue male adult (46 years)
  • date_created: 2015-09-15T19:51:42.417126+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR370RJP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (46 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR370RJP float

Histone_ChIP-seq_ENCSR370RJP
Histone_ChIP-seq ENCSR370RJP [biosample_summary="Homo sapiens endocrine pancreas tissue male adult (46 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR370RJP [2.12, 29.5]
n
11,700,264
mean
5.81
sd
3.19

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 117002640.36% 27017
chr1 999998 0.40% 2500
chr2 708068 0.29% 1779
chr3 638277 0.32% 1585
chr4 371707 0.20% 914
chr5 509593 0.28% 1236
chr6 442412 0.26% 1073
chr7 512859 0.32% 1282
chr8 361450 0.25% 888
chr9 504633 0.36% 1208
chr10 403151 0.30% 1030
chr11 531038 0.39% 1299
chr12 678935 0.51% 1581
chr13 185855 0.16% 480
chr14 373074 0.35% 919
chr15 426836 0.42% 927
chr16 591909 0.66% 1349
chr17 605732 0.73% 1464
chr18 138238 0.17% 352
chr19 1764008 3.01% 2881
chr20 332274 0.52% 790
chr21 123118 0.26% 298
chr22 312303 0.61% 756
chrX 171239 0.11% 396
chrY 13557 0.02% 30
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 27017 170 45061 433.07 349
global segment-length histogram

Files

Filename Size md5
ENCFF475VRO.bed.gz 493.2 KB 2acfa61c15e407bca5fe6754ed750f53
ENCFF475VRO.tabix.bed.gz 258.67 KB 5e9041b83e98b9985d8ee2b561d1aa52
ENCFF475VRO.tabix.bed.gz.tbi 117.76 KB 0555c0587bbf7234454fa3104c1a9109
genomic_resource.yaml 2.02 KB 0f16fbcaf220971a815f82946b1fe634
statistics/