Resource

Id Histone_ChIP-seq/ENCSR368EPJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR368EPJ [biosample_summary="Homo sapiens pancreas tissue female adult (59 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR368EPJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue female adult (59 years)
  • date_created: 2021-04-30T04:17:45.053331+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR368EPJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR368EPJ float

Histone_ChIP-seq_ENCSR368EPJ
Histone_ChIP-seq ENCSR368EPJ [biosample_summary="Homo sapiens pancreas tissue female adult (59 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR368EPJ [1.54, 5.21]
n
992,924
mean
2.82
sd
0.484

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 9929240.03% 1782
chr1 43933 0.02% 92
chr2 44068 0.02% 102
chr3 40687 0.02% 86
chr4 57280 0.03% 100
chr5 84178 0.05% 142
chr6 31397 0.02% 68
chr7 47712 0.03% 86
chr8 32910 0.02% 73
chr9 33454 0.02% 64
chr10 30031 0.02% 56
chr11 17920 0.01% 44
chr12 54804 0.04% 89
chr13 12981 0.01% 33
chr14 18665 0.02% 42
chr15 27208 0.03% 47
chr16 27160 0.03% 43
chr17 13624 0.02% 26
chr18 9218 0.01% 22
chr19 308255 0.53% 429
chr20 7970 0.01% 20
chr21 6383 0.01% 16
chr22 4807 0.01% 12
chrX 38279 0.02% 90
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1782 230 4288 557.2 443
global segment-length histogram

Files

Filename Size md5
ENCFF493TRU.bed.gz 35.19 KB b1a5bc10a763f5957e79f4eb0d49d769
ENCFF493TRU.tabix.bed.gz 18.88 KB 981b22f061e4eed05bdb3d6e5d3b109c
ENCFF493TRU.tabix.bed.gz.tbi 18.18 KB edb43211ffe48114d1822c75f15cd455
genomic_resource.yaml 1.5 KB a81b0dc018a5dd7645b3be4a9ee6f530
statistics/