Resource

Id Histone_ChIP-seq/ENCSR368BOEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR368BOE [biosample_summary="Homo sapiens lower lobe of left lung tissue male adult (60 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR368BOE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008953/
  • biosample_summary: Homo sapiens lower lobe of left lung tissue male adult (60 years)
  • date_created: 2020-05-01T02:34:42.511790+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR368BOE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR368BOE float

Histone_ChIP-seq_ENCSR368BOE
Histone_ChIP-seq ENCSR368BOE [biosample_summary="Homo sapiens lower lobe of left lung tissue male adult (60 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR368BOE [1.77, 67]
n
53,551,822
mean
26.6
sd
14.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 535518221.66% 29222
chr1 5367453 2.16% 2934
chr2 3637410 1.50% 1968
chr3 3040446 1.53% 1592
chr4 2147952 1.13% 1152
chr5 2528669 1.39% 1336
chr6 3097050 1.81% 1646
chr7 2670719 1.68% 1485
chr8 1957745 1.35% 1105
chr9 2251448 1.63% 1265
chr10 2256452 1.69% 1259
chr11 2833382 2.10% 1478
chr12 2862975 2.15% 1463
chr13 1121996 0.98% 626
chr14 1699444 1.59% 897
chr15 1723155 1.69% 949
chr16 2128077 2.36% 1201
chr17 3138042 3.77% 1661
chr18 896753 1.12% 518
chr19 3399471 5.80% 1967
chr20 1405584 2.18% 795
chr21 551810 1.18% 316
chr22 1207677 2.38% 688
chrX 1571991 1.01% 893
chrY 56121 0.10% 28
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 29222 225 19786 1832.59 1461.5
global segment-length histogram

Files

Filename Size md5
ENCFF321BAQ.bed.gz 799.85 KB 3efb9f29f6d5e526a8697bcbc3743f3e
ENCFF321BAQ.tabix.bed.gz 341.71 KB befd238c22d2f7b51423dd30f1738bdf
ENCFF321BAQ.tabix.bed.gz.tbi 173.21 KB 344eb6a05a0f47b769fb783295697fb5
genomic_resource.yaml 1.75 KB 3633f2750b9ecdb17244101eeaac4515
statistics/