Resource

Id Histone_ChIP-seq/ENCSR366OIQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR366OIQ [biosample_summary="Homo sapiens ectodermal cell originated from HUES64" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR366OIQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/in_vitro_differentiated_cells_CL_0000221/
  • biosample_summary: Homo sapiens ectodermal cell originated from HUES64
  • date_created: 2015-09-15T19:47:20.468380+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR366OIQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR366OIQ float

Histone_ChIP-seq_ENCSR366OIQ
Histone_ChIP-seq ENCSR366OIQ [biosample_summary="Homo sapiens ectodermal cell originated from HUES64" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR366OIQ [1.83, 50.7]
n
52,442,025
mean
6.03
sd
1.93

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 524420251.63% 68083
chr1 5586115 2.24% 7035
chr2 3823058 1.58% 5191
chr3 2910208 1.47% 3917
chr4 1923181 1.01% 2734
chr5 2583652 1.42% 3455
chr6 2236556 1.31% 3045
chr7 2439021 1.53% 3310
chr8 1642806 1.13% 2276
chr9 2192208 1.58% 2836
chr10 2012631 1.50% 2757
chr11 2855995 2.11% 3513
chr12 3115806 2.34% 3931
chr13 928950 0.81% 1343
chr14 1784181 1.67% 2401
chr15 1858638 1.82% 2501
chr16 2271159 2.51% 2779
chr17 3205538 3.85% 3953
chr18 918187 1.14% 1317
chr19 4122687 7.03% 4533
chr20 1572028 2.44% 1950
chr21 597854 1.28% 827
chr22 1316905 2.59% 1638
chrX 513524 0.33% 786
chrY 31137 0.05% 55
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 68083 190 13803 770.27 609
global segment-length histogram

Files

Filename Size md5
ENCFF451EGW.bed.gz 1.21 MB 6f0a517e1d7eefc9f04a628e49ecbb4e
ENCFF451EGW.tabix.bed.gz 646.56 KB 1ab048b311a53635a3e57e5fa5beba86
ENCFF451EGW.tabix.bed.gz.tbi 144.97 KB 143deb5cc64f3a862d785579a13d1488
genomic_resource.yaml 2.0 KB 90720f32ef6c9a0a7a2f7f2328bf12a1
statistics/