Resource

Id Histone_ChIP-seq/ENCSR365DWXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR365DWX [biosample_summary="Homo sapiens myoepithelial cell of mammary gland female adult (36 years)" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR365DWX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0002324/
  • biosample_summary: Homo sapiens myoepithelial cell of mammary gland female adult (36 years)
  • date_created: 2015-09-15T20:27:47.589298+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR365DWX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (36 years)
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR365DWX float

Histone_ChIP-seq_ENCSR365DWX
Histone_ChIP-seq ENCSR365DWX [biosample_summary="Homo sapiens myoepithelial cell of mammary gland female adult (36 years)" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR365DWX [1.69, 24.1]
n
19,936,807
mean
6.99
sd
2.67

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 199368070.62% 38363
chr1 1915641 0.77% 3650
chr2 1348927 0.56% 2633
chr3 1196633 0.60% 2286
chr4 848684 0.45% 1656
chr5 963882 0.53% 1829
chr6 1133176 0.66% 2131
chr7 995665 0.62% 1921
chr8 760272 0.52% 1479
chr9 824199 0.60% 1618
chr10 860065 0.64% 1682
chr11 1134797 0.84% 2169
chr12 1050198 0.79% 1939
chr13 415434 0.36% 814
chr14 649990 0.61% 1275
chr15 637514 0.63% 1254
chr16 840874 0.93% 1565
chr17 1133155 1.36% 2121
chr18 337898 0.42% 658
chr19 1321351 2.25% 2399
chr20 513150 0.80% 1008
chr21 210917 0.45% 393
chr22 469549 0.92% 933
chrX 374836 0.24% 950
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 38363 120 4944 519.69 389
global segment-length histogram

Files

Filename Size md5
ENCFF607TIS.bed.gz 695.59 KB 6eed9da2ba0dc55b9db2812b23de6f2e
ENCFF607TIS.tabix.bed.gz 364.11 KB 895e19d7e11dcaf6068e4eabc79817d8
ENCFF607TIS.tabix.bed.gz.tbi 195.08 KB 18d1c2a045cf5d6519c54fe5361505f1
genomic_resource.yaml 2.05 KB 35dc1545d96e3e0cb44c782d255fe74a
statistics/