Resource

Id Histone_ChIP-seq/ENCSR362QYUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR362QYU [biosample_summary="Homo sapiens suprapubic skin tissue male adult (37 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR362QYU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0036149/
  • biosample_summary: Homo sapiens suprapubic skin tissue male adult (37 years)
  • date_created: 2019-07-29T20:54:59.084651+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR362QYU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR362QYU float

Histone_ChIP-seq_ENCSR362QYU
Histone_ChIP-seq ENCSR362QYU [biosample_summary="Homo sapiens suprapubic skin tissue male adult (37 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR362QYU [1.69, 86.2]
n
52,256,419
mean
36.7
sd
21

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 522564191.62% 28313
chr1 5199931 2.09% 2790
chr1_KI270712v1_random 5399 3.07% 4
chr1_KI270713v1_random 739 1.81% 1
chr1_KI270714v1_random 308 0.74% 1
chr2 3570790 1.47% 1966
chr3 2867803 1.45% 1523
chr4 2047574 1.08% 1112
chr5 2417407 1.33% 1298
chr6 2977367 1.74% 1611
chr7 2534213 1.59% 1426
chr8 1925407 1.33% 1057
chr9 2211572 1.60% 1216
chr9_KI270717v1_random 1017 2.54% 1
chr10 2260879 1.69% 1249
chr11 2839439 2.10% 1477
chr12 2791340 2.09% 1436
chr13 1112664 0.97% 618
chr14 1661498 1.55% 861
chr15 1674276 1.64% 910
chr16 2027918 2.24% 1118
chr17 3125580 3.75% 1630
chr17_GL000205v2_random 2461 1.33% 2
chr18 911544 1.13% 524
chr19 3373673 5.76% 1885
chr20 1406947 2.18% 774
chr21 527896 1.13% 300
chr22 1220797 2.40% 668
chr22_KI270733v1_random 435 0.24% 1
chrUn_GL000195v1 1762 0.96% 2
chrUn_GL000219v1 5208 2.91% 4
chrUn_GL000220v1 784 0.48% 1
chrX 1495828 0.96% 820
chrY 55963 0.10% 27
3333 contigs with no values (127889259 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 28313 250 20862 1845.67 1552
global segment-length histogram

Files

Filename Size md5
ENCFF417WXG.bed.gz 788.41 KB adaacb20d289b798706d86becd14b42a
ENCFF417WXG.tabix.bed.gz 331.57 KB 35eedf505c74fe0213bca9a7b5d810be
ENCFF417WXG.tabix.bed.gz.tbi 175.86 KB f7d7911381c436414676c7a9d46b3e5d
genomic_resource.yaml 1.51 KB fedfb658141e8bdec0bfeafec3a201a1
statistics/