Resource

Id Histone_ChIP-seq/ENCSR358KIDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR358KID [biosample_summary="Homo sapiens temporal lobe tissue male adult (81 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR358KID
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001871/
  • biosample_summary: Homo sapiens temporal lobe tissue male adult (81 years)
  • date_created: 2015-09-15T19:52:00.550774+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR358KID
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (81 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR358KID float

Histone_ChIP-seq_ENCSR358KID
Histone_ChIP-seq ENCSR358KID [biosample_summary="Homo sapiens temporal lobe tissue male adult (81 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR358KID [1.92, 13.6]
n
17,634,566
mean
5.47
sd
2.03

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 176345660.55% 22024
chr1 1494354 0.60% 1883
chr2 1358191 0.56% 1667
chr3 577537 0.29% 737
chr4 682163 0.36% 759
chr5 992204 0.55% 1185
chr6 1275410 0.75% 1468
chr7 952732 0.60% 1098
chr8 742877 0.51% 1010
chr9 630826 0.46% 765
chr10 1168185 0.87% 1442
chr11 732937 0.54% 944
chr12 916970 0.69% 1051
chr13 363885 0.32% 448
chr14 737192 0.69% 935
chr15 656203 0.64% 916
chr16 744190 0.82% 990
chr17 1125655 1.35% 1274
chr18 360848 0.45% 511
chr19 735235 1.25% 996
chr20 731212 1.13% 1008
chr21 251759 0.54% 344
chr22 290624 0.57% 436
chrX 110940 0.07% 152
chrY 2437 <0.01% 5
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 22024 240 16233 800.7 584
global segment-length histogram

Files

Filename Size md5
ENCFF653YAM.bed.gz 425.2 KB e7c2ad3061a54d662d3e3afaea3e3e08
ENCFF653YAM.tabix.bed.gz 220.47 KB 1f31544d7ba6e649aa0fa422fb8a640f
ENCFF653YAM.tabix.bed.gz.tbi 101.44 KB b3948cb15c742ccae05078abf7252643
genomic_resource.yaml 2.01 KB 9ea8acb053d73cb82a5a3445242047d5
statistics/