Resource

Id Histone_ChIP-seq/ENCSR357ROScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR357ROS [biosample_summary="Homo sapiens stomach tissue female adult (53 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR357ROS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000945/
  • biosample_summary: Homo sapiens stomach tissue female adult (53 years)
  • date_created: 2016-10-19T23:19:07.416299+00:00
  • date_released: 2017-03-24
  • doi: 10.17989/ENCSR357ROS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR357ROS float

Histone_ChIP-seq_ENCSR357ROS
Histone_ChIP-seq ENCSR357ROS [biosample_summary="Homo sapiens stomach tissue female adult (53 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR357ROS [1.46, 17.2]
n
49,420,325
mean
5.36
sd
2.87

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 494203251.54% 35830
chr1 4627787 1.86% 3293
chr1_KI270712v1_random 7536 4.28% 5
chr1_KI270713v1_random 4355 10.69% 4
chr1_KI270714v1_random 549 1.32% 1
chr2 2777437 1.15% 1830
chr3 1490861 0.75% 1033
chr4 1554578 0.82% 910
chr5 2068677 1.14% 1329
chr6 2124758 1.24% 1336
chr7 2138135 1.34% 1332
chr8 1843406 1.27% 1347
chr9 1987963 1.44% 1299
chr9_KI270717v1_random 722 1.80% 1
chr10 2365957 1.77% 1634
chr11 2323172 1.72% 1655
chr12 2114332 1.59% 1478
chr13 859815 0.75% 557
chr14 1267054 1.18% 893
chr15 1271094 1.25% 940
chr16 1681292 1.86% 1135
chr17 3288855 3.95% 2107
chr17_GL000205v2_random 43926 23.67% 11
chr18 668491 0.83% 524
chr19 3058768 5.22% 1954
chr20 2227293 3.46% 1535
chr21 470310 1.01% 355
chr22 1516779 2.98% 1198
chr22_KI270733v1_random 4154 2.31% 7
chrUn_GL000195v1 758 0.41% 2
chrUn_GL000219v1 20101 11.22% 15
chrUn_GL000224v1 1396 0.78% 1
chrUn_KI270744v1 1640 0.97% 2
chrX 5607733 3.59% 6106
chrY 641 <0.01% 1
3332 contigs with no values (127702896 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 35830 290 82926 1379.3 901
global segment-length histogram

Files

Filename Size md5
ENCFF753DTA.bed.gz 697.89 KB 207fda3fea59c0b5d3dfdb16586927bb
ENCFF753DTA.tabix.bed.gz 358.17 KB 239988f67cfd1b0bbc237c1025036acc
ENCFF753DTA.tabix.bed.gz.tbi 130.42 KB 2df73767d9e2d1c1d0161bb3405120a1
genomic_resource.yaml 1.5 KB 6de741054f36274de530256c8759823c
statistics/