Resource

Id Histone_ChIP-seq/ENCSR355GNZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR355GNZ [biosample_summary="Homo sapiens coronary artery tissue female adult (51 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR355GNZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001621/
  • biosample_summary: Homo sapiens coronary artery tissue female adult (51 years)
  • date_created: 2019-07-29T21:32:02.535597+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR355GNZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR355GNZ float

Histone_ChIP-seq_ENCSR355GNZ
Histone_ChIP-seq ENCSR355GNZ [biosample_summary="Homo sapiens coronary artery tissue female adult (51 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR355GNZ [1.33, 43.9]
n
71,348,367
mean
9.85
sd
6.07

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 713483672.22% 47574
chr1 7375154 2.96% 4643
chr1_KI270713v1_random 614 1.51% 1
chr2 5525577 2.28% 3856
chr3 5055041 2.55% 3317
chr4 2932874 1.54% 1994
chr5 3442483 1.90% 2427
chr6 3790014 2.22% 2672
chr7 3026535 1.90% 2091
chr8 2729239 1.88% 1977
chr9 3251268 2.35% 2072
chr10 4061928 3.04% 2751
chr11 3923746 2.90% 2472
chr12 3833863 2.88% 2528
chr13 1633784 1.43% 1095
chr14 2286765 2.14% 1495
chr15 2591335 2.54% 1676
chr16 2342651 2.59% 1586
chr17 3629250 4.36% 2272
chr18 1278231 1.59% 894
chr19 2867806 4.89% 1841
chr20 2038379 3.16% 1316
chr21 827538 1.77% 558
chr22 1541036 3.03% 913
chrUn_GL000195v1 1295 0.71% 2
chrUn_GL000219v1 1429 0.80% 1
chrX 1360532 0.87% 1124
3340 contigs with no values (185901661 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 47574 210 47653 1499.73 1048
global segment-length histogram

Files

Filename Size md5
ENCFF907LMU.bed.gz 1.14 MB 67a9d2f244d699ee6ac0a6bbed7fbd80
ENCFF907LMU.tabix.bed.gz 524.47 KB f1f6066fb674878b3ddb8ff45ec9aa27
ENCFF907LMU.tabix.bed.gz.tbi 187.74 KB bbb51dcbb1364201452f070740346397
genomic_resource.yaml 1.52 KB 09d65dad5d1a647655ad2b2f221581ad
statistics/