Resource

Id Histone_ChIP-seq/ENCSR351OACcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR351OAC [biosample_summary="Homo sapiens BLaER1 36 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR351OAC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 36 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:51.003705+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR351OAC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 36 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR351OAC float

Histone_ChIP-seq_ENCSR351OAC
Histone_ChIP-seq ENCSR351OAC [biosample_summary="Homo sapiens BLaER1 36 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR351OAC [1.66, 105]
n
77,756,988
mean
23.2
sd
20.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 777569882.42% 56860
chr1 7541743 3.03% 5570
chr2 4962542 2.05% 3699
chr3 3889166 1.96% 2903
chr4 2416019 1.27% 1844
chr5 3342904 1.84% 2319
chr6 3763258 2.20% 2707
chr7 3439742 2.16% 2626
chr8 2984846 2.06% 2231
chr9 3373862 2.44% 2491
chr10 3421911 2.56% 2434
chr11 4130935 3.06% 2911
chr12 4044930 3.04% 2926
chr13 1391763 1.22% 986
chr14 2478678 2.32% 1752
chr15 2430426 2.38% 1743
chr16 3982105 4.41% 2997
chr17 5483724 6.59% 3973
chr18 1188992 1.48% 880
chr19 5814886 9.92% 4154
chr20 2580076 4.00% 1900
chr21 873436 1.87% 672
chr22 2371821 4.67% 1815
chrX 1849223 1.19% 1327
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 56860 205 26943 1367.52 861
global segment-length histogram

Files

Filename Size md5
ENCFF904XEX.bed.gz 1.47 MB 426a48caf4301a2b0d9b0e7c421463dd
ENCFF904XEX.tabix.bed.gz 638.26 KB 356dc49e7390f83b7f4c49b704d84f59
ENCFF904XEX.tabix.bed.gz.tbi 197.45 KB ba7f7e0a7fea448e56d88c89d83d6040
genomic_resource.yaml 2.31 KB 031282bfffc1b47c0afe4fe7e46c6665
statistics/