Resource

Id Histone_ChIP-seq/ENCSR351DLFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR351DLF [biosample_summary="Homo sapiens liver tissue male adult (31 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR351DLF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002107/
  • biosample_summary: Homo sapiens liver tissue male adult (31 years)
  • date_created: 2015-09-15T19:52:16.843731+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR351DLF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (31 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR351DLF float

Histone_ChIP-seq_ENCSR351DLF
Histone_ChIP-seq ENCSR351DLF [biosample_summary="Homo sapiens liver tissue male adult (31 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR351DLF [1.64, 13]
n
10,291,408
mean
4.91
sd
1.53

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 102914080.32% 30968
chr1 527001 0.21% 1744
chr2 522179 0.22% 1752
chr3 393196 0.20% 1322
chr4 468944 0.25% 1543
chr5 674541 0.37% 1987
chr6 311364 0.18% 1102
chr7 574496 0.36% 1894
chr8 353982 0.24% 1206
chr9 311204 0.22% 959
chr10 445158 0.33% 1381
chr11 275793 0.20% 1015
chr12 475715 0.36% 1370
chr13 165068 0.14% 614
chr14 150285 0.14% 575
chr15 245527 0.24% 707
chr16 417175 0.46% 1210
chr17 171483 0.21% 556
chr18 149464 0.19% 522
chr19 2461889 4.20% 5647
chr20 200249 0.31% 639
chr21 173806 0.37% 420
chr22 85023 0.17% 285
chrX 714207 0.46% 2468
chrY 23659 0.04% 50
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 30968 140 13346 332.32 248
global segment-length histogram

Files

Filename Size md5
ENCFF181IUT.bed.gz 524.17 KB d1cf9e96621474504b1f869ec6b05d50
ENCFF181IUT.tabix.bed.gz 285.8 KB fa03a244d89d6ca9c021495239ce562b
ENCFF181IUT.tabix.bed.gz.tbi 136.55 KB 77474f0ea2770059b84dadab926ecfc9
genomic_resource.yaml 1.97 KB 9dcef1bb233d2930ac66d83982bae8fb
statistics/