Resource

Id Histone_ChIP-seq/ENCSR348TQMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR348TQM [biosample_summary="Homo sapiens body of pancreas tissue male adult (54 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR348TQM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001150/
  • biosample_summary: Homo sapiens body of pancreas tissue male adult (54 years)
  • date_created: 2016-03-19T00:36:34.685694+00:00
  • date_released: 2016-10-29
  • doi: 10.17989/ENCSR348TQM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR348TQM float

Histone_ChIP-seq_ENCSR348TQM
Histone_ChIP-seq ENCSR348TQM [biosample_summary="Homo sapiens body of pancreas tissue male adult (54 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR348TQM [1.52, 15.2]
n
142,857,662
mean
4.68
sd
1.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1428576624.44% 116764
chr1 14713849 5.91% 11501
chr2 11382723 4.70% 9622
chr3 9096882 4.59% 7732
chr4 6316408 3.32% 5707
chr5 7310906 4.03% 6128
chr6 7944703 4.65% 6780
chr7 7460244 4.68% 6292
chr8 6184280 4.26% 5126
chr9 6360763 4.60% 4947
chr10 7346979 5.49% 6066
chr11 7516277 5.56% 5851
chr12 6884473 5.17% 5764
chr13 3449825 3.02% 2974
chr14 5127712 4.79% 4027
chr15 5182012 5.08% 4096
chr16 5227394 5.79% 3978
chr17 6948939 8.35% 5152
chr18 2873144 3.57% 2403
chr19 5186019 8.85% 3987
chr20 3780051 5.87% 3004
chr21 1489134 3.19% 1293
chr22 3164215 6.23% 2297
chrX 1853806 1.19% 1964
chrY 56924 0.10% 73
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 116764 230 27693 1223.47 913
global segment-length histogram

Files

Filename Size md5
ENCFF983PFQ.bed.gz 2.83 MB bea52b71d17269d62f880471e3552a5b
ENCFF983PFQ.tabix.bed.gz 1.24 MB 797ecaa4bd91ae74a0c7fe138fa0fbc9
ENCFF983PFQ.tabix.bed.gz.tbi 330.06 KB d3a3d0d3d2980b414fd7379b7aae8fbc
genomic_resource.yaml 1.73 KB 013da3486aa16b4fe9aaa147a865e9ef
statistics/