Resource

Id Histone_ChIP-seq/ENCSR345GSHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR345GSH [biosample_summary="Homo sapiens heart right ventricle tissue male adult (40 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR345GSH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male adult (40 years)
  • date_created: 2020-05-01T02:11:51.136395+00:00
  • date_released: 2020-09-15
  • doi: 10.17989/ENCSR345GSH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (40 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR345GSH float

Histone_ChIP-seq_ENCSR345GSH
Histone_ChIP-seq ENCSR345GSH [biosample_summary="Homo sapiens heart right ventricle tissue male adult (40 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR345GSH [1.81, 8.86]
n
4,134,312
mean
3.56
sd
0.732

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 41343120.13% 7181
chr1 376143 0.15% 693
chr2 207609 0.09% 400
chr3 205790 0.10% 357
chr4 76523 0.04% 155
chr5 156399 0.09% 303
chr6 117397 0.07% 233
chr7 174715 0.11% 307
chr8 105703 0.07% 183
chr9 175864 0.13% 307
chr10 124854 0.09% 229
chr11 237298 0.18% 399
chr12 280667 0.21% 491
chr13 50676 0.04% 102
chr14 129378 0.12% 224
chr15 119851 0.12% 223
chr16 251215 0.28% 435
chr17 276996 0.33% 483
chr18 28530 0.04% 58
chr19 700745 1.20% 1003
chr20 122593 0.19% 230
chr21 37282 0.08% 73
chr22 167544 0.33% 278
chrX 10540 0.01% 15
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 7181 210 4255 575.73 483
global segment-length histogram

Files

Filename Size md5
ENCFF690HEH.bed.gz 134.76 KB a11c443405587cdf315d15af5dd3d406
ENCFF690HEH.tabix.bed.gz 73.11 KB 3ac0e2230a8e699ab439ff7f283b5b8e
ENCFF690HEH.tabix.bed.gz.tbi 46.46 KB 73e593dfe364a9a6db602d5720d21a36
genomic_resource.yaml 1.74 KB 67a151b8566dce8ceb59c7d3425d417f
statistics/