Resource

Id Histone_ChIP-seq/ENCSR343DFXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR343DFX [biosample_summary="Homo sapiens spleen tissue female adult (41 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR343DFX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (41 years)
  • date_created: 2020-05-01T02:59:38.540650+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR343DFX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR343DFX float

Histone_ChIP-seq_ENCSR343DFX
Histone_ChIP-seq ENCSR343DFX [biosample_summary="Homo sapiens spleen tissue female adult (41 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR343DFX [1.71, 67.8]
n
67,854,949
mean
10.8
sd
8.67

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 678549492.11% 50678
chr1 6855113 2.75% 5001
chr2 5255305 2.17% 3995
chr3 4087369 2.06% 3163
chr4 2515251 1.32% 1963
chr5 3217549 1.77% 2396
chr6 3765055 2.20% 2840
chr7 3035681 1.91% 2352
chr8 2633395 1.81% 2082
chr9 2796784 2.02% 2153
chr10 3278768 2.45% 2442
chr11 3756776 2.78% 2661
chr12 3730646 2.80% 2720
chr13 1354721 1.18% 1048
chr14 2522036 2.36% 1869
chr15 2417340 2.37% 1728
chr16 2344216 2.59% 1777
chr17 3915728 4.70% 2803
chr18 1119652 1.39% 869
chr19 3461636 5.91% 2486
chr20 1950498 3.03% 1462
chr21 874452 1.87% 659
chr22 1659857 3.27% 1158
chrX 1307121 0.84% 1051
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 50678 220 26366 1338.94 957
global segment-length histogram

Files

Filename Size md5
ENCFF758DTU.bed.gz 1.1 MB e2d4110ebbb14e8ed0f23ab146f4fc0d
ENCFF758DTU.tabix.bed.gz 533.78 KB 83e4548379c1d590f79b444edab639ea
ENCFF758DTU.tabix.bed.gz.tbi 196.92 KB 8f4dd31ec4c8c583d3b75031054f9f87
genomic_resource.yaml 1.71 KB a239e5527af0ac461ec0ebec39ed7a48
statistics/