Resource

Id Histone_ChIP-seq/ENCSR342KXDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR342KXD [biosample_summary="Homo sapiens heart right ventricle tissue male adult (43 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR342KXD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male adult (43 years)
  • date_created: 2021-08-25T18:07:58.392009+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR342KXD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (43 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR342KXD float

Histone_ChIP-seq_ENCSR342KXD
Histone_ChIP-seq ENCSR342KXD [biosample_summary="Homo sapiens heart right ventricle tissue male adult (43 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR342KXD [2.11, 74.4]
n
133,221,440
mean
14.5
sd
11.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1332214404.14% 81153
chr1 13104638 5.26% 7782
chr2 10298153 4.25% 6505
chr3 9085461 4.58% 5338
chr4 5761220 3.03% 3497
chr5 7332758 4.04% 4419
chr6 7442120 4.36% 4638
chr7 5885276 3.69% 3792
chr8 5794755 3.99% 3677
chr9 5769044 4.17% 3500
chr10 7397220 5.53% 4343
chr11 6714034 4.97% 4128
chr12 7072671 5.31% 4044
chr13 3364818 2.94% 2075
chr14 4227623 3.95% 2558
chr15 4784997 4.69% 2938
chr16 4325735 4.79% 2691
chr17 6689593 8.03% 3835
chr18 2838407 3.53% 1775
chr19 4696820 8.01% 2741
chr20 3518657 5.46% 2147
chr21 1366762 2.93% 921
chr22 3137120 6.17% 1793
chrX 2526567 1.62% 1956
chrY 86991 0.15% 60
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 81153 220 49087 1641.61 1134
global segment-length histogram

Files

Filename Size md5
ENCFF600QTP.bed.gz 2.02 MB f4abe3ba92b0ee951e33843a88c64117
ENCFF600QTP.tabix.bed.gz 896.4 KB d4a966ce5d04b43c62f05049302c8a10
ENCFF600QTP.tabix.bed.gz.tbi 259.09 KB cb531536d1bb6d8bfd0c916c82d2717d
genomic_resource.yaml 1.53 KB db94ed95adfd8c3adb78d90d4cc36f20
statistics/