Resource

Id Histone_ChIP-seq/ENCSR341AXRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR341AXR [biosample_summary="Homo sapiens spleen tissue female adult (59 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR341AXR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (59 years)
  • date_created: 2020-05-01T03:03:06.029865+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR341AXR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR341AXR float

Histone_ChIP-seq_ENCSR341AXR
Histone_ChIP-seq ENCSR341AXR [biosample_summary="Homo sapiens spleen tissue female adult (59 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR341AXR [1.57, 5.73]
n
5,350,220
mean
3.07
sd
0.604

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 53502200.17% 10972
chr1 315572 0.13% 713
chr2 298207 0.12% 674
chr3 244766 0.12% 562
chr4 300631 0.16% 634
chr5 313603 0.17% 659
chr6 181953 0.11% 447
chr7 277469 0.17% 594
chr8 223830 0.15% 518
chr9 202054 0.15% 416
chr10 200330 0.15% 425
chr11 165923 0.12% 401
chr12 311682 0.23% 629
chr13 90485 0.08% 218
chr14 118114 0.11% 288
chr15 132922 0.13% 279
chr16 162605 0.18% 332
chr17 87412 0.10% 186
chr18 83181 0.10% 197
chr19 1319500 2.25% 2030
chr20 53105 0.08% 129
chr21 88518 0.19% 184
chr22 47448 0.09% 118
chrX 130910 0.08% 339
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 10972 205 7174 487.62 371
global segment-length histogram

Files

Filename Size md5
ENCFF848NYO.bed.gz 203.55 KB 18bbfef85b05ab13c37c0c6f873de047
ENCFF848NYO.tabix.bed.gz 110.55 KB 648a8d0b4b52762d0fd55267bf2391b9
ENCFF848NYO.tabix.bed.gz.tbi 65.98 KB 6f0b6e5ec974203b5615cda92e5e1d82
genomic_resource.yaml 1.71 KB 157b33a301c53c5a9b744342c45ac763
statistics/