Resource

Id Histone_ChIP-seq/ENCSR340ZTBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR340ZTB [biosample_summary="Homo sapiens skin epidermis tissue female adult (80 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR340ZTB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001003/
  • biosample_summary: Homo sapiens skin epidermis tissue female adult (80 years)
  • date_created: 2020-07-02T16:52:56.762669+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR340ZTB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (80 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR340ZTB float

Histone_ChIP-seq_ENCSR340ZTB
Histone_ChIP-seq ENCSR340ZTB [biosample_summary="Homo sapiens skin epidermis tissue female adult (80 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR340ZTB [1.78, 72.4]
n
77,901,395
mean
11.3
sd
10.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 779013952.42% 62283
chr1 8238121 3.31% 6350
chr2 5955213 2.46% 4964
chr3 4677085 2.36% 3840
chr4 2510582 1.32% 2224
chr5 3673755 2.02% 3118
chr6 4168187 2.44% 3476
chr7 3321652 2.08% 2748
chr8 2997042 2.06% 2628
chr9 3737760 2.70% 2910
chr10 3966104 2.96% 3261
chr11 4282285 3.17% 3225
chr12 4131937 3.10% 3084
chr13 1511786 1.32% 1352
chr14 2731948 2.55% 2114
chr15 2875095 2.82% 2262
chr16 2914916 3.23% 2302
chr17 4638055 5.57% 3413
chr18 1363805 1.70% 1183
chr19 3706138 6.32% 2620
chr20 2233934 3.47% 1762
chr21 1063145 2.28% 855
chr22 2013960 3.96% 1539
chrX 1188890 0.76% 1053
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 62283 230 22285 1250.76 866
global segment-length histogram

Files

Filename Size md5
ENCFF289XOR.bed.gz 1.42 MB 72b2d3782f712786545eaa0ae3bfc58a
ENCFF289XOR.tabix.bed.gz 667.47 KB 750d4016b11c75bd187b652962e8aa39
ENCFF289XOR.tabix.bed.gz.tbi 228.28 KB b306d396e680a21b3b074e76620b8bd3
genomic_resource.yaml 1.73 KB df2c2fb79e8459975b488e410e5db460
statistics/