Resource

Id Histone_ChIP-seq/ENCSR336ZSZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR336ZSZ [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (27 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR336ZSZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell male adult (27 years)
  • date_created: 2015-09-15T20:26:53.684492+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR336ZSZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (27 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR336ZSZ float

Histone_ChIP-seq_ENCSR336ZSZ
Histone_ChIP-seq ENCSR336ZSZ [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (27 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR336ZSZ [1.91, 25.5]
n
23,617,345
mean
7.09
sd
3.29

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 236173450.73% 49248
chr1 2526789 1.01% 5288
chr2 1638239 0.68% 3380
chr3 1327485 0.67% 2756
chr4 752214 0.40% 1499
chr5 1076828 0.59% 2108
chr6 1368336 0.80% 2723
chr7 1017396 0.64% 2130
chr8 763329 0.53% 1610
chr9 942283 0.68% 2039
chr10 980440 0.73% 2165
chr11 1392756 1.03% 2753
chr12 1271454 0.95% 2535
chr13 452173 0.40% 921
chr14 904095 0.84% 1853
chr15 765824 0.75% 1669
chr16 1046867 1.16% 2229
chr17 1591913 1.91% 3401
chr18 314155 0.39% 669
chr19 1513828 2.58% 3069
chr20 679616 1.05% 1521
chr21 235140 0.50% 511
chr22 665680 1.31% 1498
chrX 373522 0.24% 891
chrY 16983 0.03% 30
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 49248 145 6145 479.56 309
global segment-length histogram

Files

Filename Size md5
ENCFF821ZEY.bed.gz 937.18 KB daddd81bee0ed77553931685d38fb936
ENCFF821ZEY.tabix.bed.gz 480.94 KB e529103dbfdf8de59b52a438b20a760f
ENCFF821ZEY.tabix.bed.gz.tbi 184.09 KB 62d092d7500123ab379f64cd5ce6a184
genomic_resource.yaml 2.05 KB 1731be45868d70de111b97a50974fe80
statistics/