Resource

Id Histone_ChIP-seq/ENCSR334FVCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR334FVC [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR334FVC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-08-25T18:07:30.928839+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR334FVC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR334FVC float

Histone_ChIP-seq_ENCSR334FVC
Histone_ChIP-seq ENCSR334FVC [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR334FVC [1.65, 11.1]
n
47,366,596
mean
4.06
sd
1.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 473665961.47% 62768
chr1 1739046 0.70% 2261
chr2 1773715 0.73% 2183
chr3 660526 0.33% 868
chr4 995342 0.52% 1153
chr5 1316459 0.73% 1531
chr6 1728040 1.01% 1825
chr7 1233889 0.77% 1309
chr8 1018593 0.70% 1361
chr9 770447 0.56% 891
chr10 1415296 1.06% 1771
chr11 819393 0.61% 1067
chr12 1157887 0.87% 1373
chr13 553232 0.48% 657
chr14 1122177 1.05% 1374
chr15 885445 0.87% 1202
chr16 1012520 1.12% 1412
chr17 1333675 1.60% 1471
chr18 511381 0.64% 712
chr19 985701 1.68% 1344
chr20 943954 1.46% 1276
chr21 388288 0.83% 551
chr22 416901 0.82% 650
chrX 24584689 15.76% 34526
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 62768 180 30619 754.63 556
global segment-length histogram

Files

Filename Size md5
ENCFF215KEC.bed.gz 1.1 MB 39eb7039ecd4a266aa84a174d2df7dd2
ENCFF215KEC.tabix.bed.gz 590.86 KB ef66bb4142addefa85eb1b413f54c915
ENCFF215KEC.tabix.bed.gz.tbi 145.49 KB 9362c5d84efa1d2ad1c7124f9f0eb741
genomic_resource.yaml 1.62 KB d19a1ef3987516d83954e6292f86ee4f
statistics/