Resource

Id	Histone_ChIP-seq/ENCSR333OPWcontent_copy
Type	position_score
Version	0
Summary	Histone_ChIP-seq ENCSR333OPW [biosample_summary="Homo sapiens HCT116" and target="H3K4me3"]
Description
Labels	accession: ENCSR333OPW assay_term_name: ChIP-seq biosample_ontology: /biosample-types/cell_line_EFO_0002824/ biosample_summary: Homo sapiens HCT116 date_created: 2014-02-20T05:42:02.833456+00:00 date_released: 2016-11-18 doi: 10.17989/ENCSR333OPW perturbed: False reference_genome: hg38/genomes/GRCh38-hg38 replication_type: isogenic simple_biosample_summary: status: released submitter_comment: Files ENCFF183OZI, ENCFF659FPR had incorrectly identified paired_end 1 and 2 metadata respectively. They have been corrected to match its fastq file flowcell signature accordingly. target: H3K4me3

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
Histone_ChIP-seq_ENCSR333OPW	float	Histone_ChIP-seq_ENCSR333OPW	Histone_ChIP-seq ENCSR333OPW [biosample_summary="Homo sapiens HCT116" and target="H3K4me3"]		[1.81, 77.7]	n 47,406,764 mean 28.3 sd 17.7

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	47406764	1.47%	31430
chr1	4747544	1.91%	3124
chr2	3289988	1.36%	2236
chr3	2642727	1.33%	1754
chr4	1941374	1.02%	1336
chr5	2136100	1.18%	1372
chr6	2715637	1.59%	1838
chr7	2312658	1.45%	1586
chr8	1883481	1.30%	1273
chr9	1890402	1.37%	1262
chr10	2190865	1.64%	1513
chr11	2508231	1.86%	1596
chr12	2536652	1.90%	1636
chr13	887526	0.78%	604
chr14	1498825	1.40%	991
chr15	1458036	1.43%	981
chr16	1979034	2.19%	1290
chr17	2908751	3.49%	1824
chr18	787061	0.98%	564
chr19	2942618	5.02%	1826
chr20	1279494	1.99%	877
chr21	417264	0.89%	293
chr22	1163284	2.29%	785
chrX	1258285	0.81%	848
chrY	30927	0.05%	21
3342 contigs with no values (129077085 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	31430	232	14404	1508.33	1204