Resource

Id Histone_ChIP-seq/ENCSR333HMTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR333HMT [biosample_summary="Homo sapiens sigmoid colon tissue male adult (54 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR333HMT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue male adult (54 years)
  • date_created: 2017-12-06T21:22:46.780255+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR333HMT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR333HMT float

Histone_ChIP-seq_ENCSR333HMT
Histone_ChIP-seq ENCSR333HMT [biosample_summary="Homo sapiens sigmoid colon tissue male adult (54 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR333HMT [1.54, 12.2]
n
75,184,101
mean
3.56
sd
0.946

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 751841012.34% 52575
chr1 7631886 3.07% 5160
chr1_KI270711v1_random 1087 2.58% 1
chr2 5519988 2.28% 4111
chr3 4432772 2.24% 3350
chr4 2782974 1.46% 2277
chr5 3470616 1.91% 2598
chr6 3170270 1.86% 2432
chr7 3250823 2.04% 2354
chr8 2271445 1.57% 1753
chr9 3546410 2.56% 2415
chr10 3402473 2.54% 2456
chr11 4100646 3.04% 2710
chr12 4504160 3.38% 2926
chr13 1427807 1.25% 1134
chr14 2701442 2.52% 1953
chr15 2847887 2.79% 2111
chr16 3715303 4.11% 2335
chr17 4433302 5.32% 2871
chr18 1026602 1.28% 838
chr19 5424912 9.25% 2985
chr20 2291410 3.56% 1569
chr21 873825 1.87% 633
chr22 1973878 3.88% 1251
chrX 366099 0.23% 335
chrY 16084 0.03% 17
3341 contigs with no values (129034875 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 52575 275 38327 1430.04 1034
global segment-length histogram

Files

Filename Size md5
ENCFF871EQF.bed.gz 1.16 MB 1fd51fa196b9e22d9d05c1e566922bb1
ENCFF871EQF.tabix.bed.gz 562.18 KB 6619aa60d5607ded6b6c8ca9201c8d39
ENCFF871EQF.tabix.bed.gz.tbi 125.77 KB 54261b0d8b4bcc3dec3b34f452a26430
genomic_resource.yaml 1.51 KB 5ba175be79d136d4080e4409cd3bec99
statistics/