Resource

Id Histone_ChIP-seq/ENCSR326NQFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR326NQF [biosample_summary="Homo sapiens H1" and target="H3K23me2"]
Description
Labels
  • accession: ENCSR326NQF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2015-10-01T07:15:57.295349+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR326NQF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K23me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR326NQF float

Histone_ChIP-seq_ENCSR326NQF
Histone_ChIP-seq ENCSR326NQF [biosample_summary="Homo sapiens H1" and target="H3K23me2"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR326NQF [1.74, 35.8]
n
19,240,752
mean
6.48
sd
3.37

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 192407520.60% 48303
chr1 1800487 0.72% 4576
chr2 1311212 0.54% 3313
chr3 942285 0.48% 2470
chr4 792474 0.42% 2034
chr5 895471 0.49% 2301
chr6 990057 0.58% 2506
chr7 945675 0.59% 2330
chr8 793187 0.55% 1957
chr9 832479 0.60% 2044
chr10 894660 0.67% 2283
chr11 1071597 0.79% 2646
chr12 984402 0.74% 2457
chr13 409823 0.36% 1074
chr14 621207 0.58% 1533
chr15 564041 0.55% 1438
chr16 865922 0.96% 2111
chr17 1085128 1.30% 2625
chr18 369668 0.46% 940
chr19 1284326 2.19% 3100
chr20 616397 0.96% 1583
chr21 252386 0.54% 577
chr22 529353 1.04% 1273
chrX 311061 0.20% 923
chrY 77454 0.14% 209
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 48303 123 7396 398.33 319
global segment-length histogram

Files

Filename Size md5
ENCFF567WXW.bed.gz 1011.57 KB 70308a9eef5a4af2a62ff7dc191e5406
ENCFF567WXW.tabix.bed.gz 485.17 KB dfc9b215edbeea8fb2bee7e2403990a8
ENCFF567WXW.tabix.bed.gz.tbi 229.99 KB bbc3d9680643705f1db64c467de9ad3a
genomic_resource.yaml 2.09 KB abe8d3f2f550898a85cba7ac9cfcf039
statistics/