Resource

Id Histone_ChIP-seq/ENCSR324JDCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR324JDC [biosample_summary="Homo sapiens endocrine pancreas tissue male adult (45 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR324JDC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000016/
  • biosample_summary: Homo sapiens endocrine pancreas tissue male adult (45 years)
  • date_created: 2015-09-15T20:27:25.440398+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR324JDC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (45 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR324JDC float

Histone_ChIP-seq_ENCSR324JDC
Histone_ChIP-seq ENCSR324JDC [biosample_summary="Homo sapiens endocrine pancreas tissue male adult (45 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR324JDC [2.05, 65.4]
n
70,731,927
mean
10.4
sd
7.42

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 707319272.20% 74789
chr1 7419839 2.98% 7729
chr2 4469579 1.85% 5054
chr3 4025334 2.03% 4529
chr4 2471220 1.30% 2753
chr5 3036857 1.67% 3520
chr6 3534019 2.07% 3890
chr7 3512466 2.20% 3908
chr8 2749258 1.89% 3083
chr9 3156615 2.28% 3226
chr10 3305484 2.47% 3516
chr11 4080391 3.02% 4032
chr12 3471504 2.60% 3563
chr13 1423383 1.24% 1650
chr14 2428530 2.27% 2541
chr15 2124353 2.08% 2386
chr16 3470638 3.84% 3390
chr17 4649365 5.58% 4499
chr18 1131521 1.41% 1267
chr19 4195974 7.16% 3814
chr20 2326622 3.61% 2396
chr21 703459 1.51% 761
chr22 2144160 4.22% 2113
chrX 876553 0.56% 1145
chrY 24803 0.04% 24
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 74789 160 25086 945.75 607
global segment-length histogram

Files

Filename Size md5
ENCFF659NCA.bed.gz 1.39 MB 224a95c70afbef4a2326d9fa1dc7e8c4
ENCFF659NCA.tabix.bed.gz 723.3 KB b98ac224f87bc72d36adc8b8fbc3dcb7
ENCFF659NCA.tabix.bed.gz.tbi 218.83 KB 5bb58da334e0b334419a5020153e26f3
genomic_resource.yaml 2.01 KB 2584bc5992a0fe5741e274bcd55128b6
statistics/