Resource

Id Histone_ChIP-seq/ENCSR317MKRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR317MKR [biosample_summary="Homo sapiens kidney tissue female embryo (120 days)" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR317MKR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002113/
  • biosample_summary: Homo sapiens kidney tissue female embryo (120 days)
  • date_created: 2015-09-15T19:52:21.003104+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR317MKR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (120 days)
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR317MKR float

Histone_ChIP-seq_ENCSR317MKR
Histone_ChIP-seq ENCSR317MKR [biosample_summary="Homo sapiens kidney tissue female embryo (120 days)" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR317MKR [2.06, 56.1]
n
17,896,744
mean
12.2
sd
6.77

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 178967440.56% 26185
chr1 1766514 0.71% 2541
chr2 1350268 0.56% 1851
chr3 1106849 0.56% 1543
chr4 828516 0.44% 1133
chr5 920855 0.51% 1267
chr6 1231521 0.72% 1637
chr7 873395 0.55% 1282
chr8 625700 0.43% 951
chr9 663099 0.48% 1032
chr10 777406 0.58% 1153
chr11 917398 0.68% 1347
chr12 1031505 0.77% 1493
chr13 409007 0.36% 570
chr14 604215 0.56% 814
chr15 641098 0.63% 906
chr16 561545 0.62% 948
chr17 915553 1.10% 1421
chr18 304275 0.38% 455
chr19 1004074 1.71% 1630
chr20 399833 0.62% 635
chr21 155102 0.33% 242
chr22 297160 0.58% 504
chrX 511856 0.33% 830
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 26185 170 9048 683.47 519
global segment-length histogram

Files

Filename Size md5
ENCFF138PYK.bed.gz 580.7 KB 5f9aae230b91b8d0f29d2e5f09e6b068
ENCFF138PYK.tabix.bed.gz 277.78 KB 45e782ca3409cc4a63248715b37bc44e
ENCFF138PYK.tabix.bed.gz.tbi 124.34 KB 6ff8abcdfa72007e78dbc3a804c7c616
genomic_resource.yaml 1.5 KB 52548f44cf78ba8cd182124c7e7bf3eb
statistics/