Resource

Id Histone_ChIP-seq/ENCSR314SPWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR314SPW [biosample_summary="Homo sapiens tibial nerve tissue female adult (53 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR314SPW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001323/
  • biosample_summary: Homo sapiens tibial nerve tissue female adult (53 years)
  • date_created: 2017-01-24T04:40:09.134515+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR314SPW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR314SPW float

Histone_ChIP-seq_ENCSR314SPW
Histone_ChIP-seq ENCSR314SPW [biosample_summary="Homo sapiens tibial nerve tissue female adult (53 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR314SPW [1.46, 32.8]
n
33,578,211
mean
12.7
sd
5.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 335782111.04% 26327
chr1 3315115 1.33% 2600
chr1_KI270712v1_random 368 0.21% 1
chr1_KI270713v1_random 577 1.42% 1
chr2 2276454 0.94% 1747
chr3 1962079 0.99% 1472
chr4 1393081 0.73% 1067
chr5 1627714 0.90% 1162
chr6 1980426 1.16% 1505
chr7 1635004 1.03% 1290
chr8 1255177 0.86% 994
chr9 1365330 0.99% 1113
chr9_KI270717v1_random 509 1.27% 1
chr10 1468812 1.10% 1135
chr11 1866672 1.38% 1420
chr12 1808398 1.36% 1338
chr13 696383 0.61% 534
chr14 1101863 1.03% 852
chr15 1108999 1.09% 878
chr16 1240052 1.37% 1051
chr17 1960967 2.36% 1548
chr17_GL000205v2_random 2162 1.16% 2
chr18 583275 0.73% 487
chr19 2041588 3.48% 1688
chr20 819910 1.27% 661
chr21 329455 0.71% 278
chr22 744691 1.47% 618
chrUn_GL000195v1 965 0.53% 2
chrUn_GL000219v1 2060 1.15% 3
chrUn_KI270438v1 1357 1.21% 3
chrUn_KI270466v1 397 32.20% 1
chrUn_KI270467v1 1499 38.24% 1
chrX 986872 0.63% 874
3334 contigs with no values (185382307 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 26327 205 18293 1275.43 1053
global segment-length histogram

Files

Filename Size md5
ENCFF453WPU.bed.gz 673.39 KB 39af6ba1806f316729ebe55fc759fd4c
ENCFF453WPU.tabix.bed.gz 298.34 KB 8a0178414c90073f94815a24fd602884
ENCFF453WPU.tabix.bed.gz.tbi 150.63 KB 164c854d831406b4fe03223f38a1a862
genomic_resource.yaml 1.51 KB 59660ca63d4dcba4c9da53a394af1d49
statistics/