Resource

Id Histone_ChIP-seq/ENCSR311DQOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR311DQO [biosample_summary="Homo sapiens ACC112" and target="H2AFZ"]
Description
Labels
  • accession: ENCSR311DQO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0007070/
  • biosample_summary: Homo sapiens ACC112
  • date_created: 2014-02-20T05:42:41.725883+00:00
  • date_released: 2017-01-10
  • doi: 10.17989/ENCSR311DQO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment: This experiment is unreplicated due to limited biosamples.
  • target: H2AFZ

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR311DQO float

Histone_ChIP-seq_ENCSR311DQO

Histone_ChIP-seq ENCSR311DQO [biosample_summary="Homo sapiens ACC112" and target="H2AFZ"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR311DQO [1.77, 21.6]
n
46,254,424
mean
5.63
sd
1.89

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 462544241.44% 78973
chr1 4355779 1.75% 7262
chr2 4056489 1.67% 6870
chr3 3666300 1.85% 6216
chr4 3262732 1.72% 5610
chr5 3050275 1.68% 5180
chr6 3411898 2.00% 5669
chr7 2402591 1.51% 4083
chr8 2373151 1.64% 3996
chr9 1808890 1.31% 3072
chr10 1958567 1.46% 3209
chr11 2039517 1.51% 3507
chr12 2503985 1.88% 4310
chr13 1207714 1.06% 2166
chr14 1453723 1.36% 2359
chr15 1426449 1.40% 2340
chr16 1025794 1.14% 1795
chr17 1538610 1.85% 2686
chr17_GL000205v2_random 1656 0.89% 2
chr18 1200980 1.49% 2016
chr19 841822 1.44% 1698
chr20 774614 1.20% 1352
chr21 512592 1.10% 864
chr22 313903 0.62% 652
chrUn_GL000219v1 889 0.50% 2
chrX 1040058 0.67% 2016
chrY 25446 0.04% 41
3340 contigs with no values (128712296 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 78973 180 3816 585.7 490
global segment-length histogram

Files

Filename Size md5
ENCFF285FXD.bed.gz 1.68 MB 6b44e1212330fd887d82d0e4da266df8
ENCFF285FXD.tabix.bed.gz 811.82 KB 1c1ae98618bd9efdec3e7d1cfe89cb04
ENCFF285FXD.tabix.bed.gz.tbi 325.06 KB d595e40ae3033ebaeaee9efdca18f751
genomic_resource.yaml 1.42 KB 9a2f0a902143a5c4546baa57f1964dfa
statistics/