Resource

Id Histone_ChIP-seq/ENCSR309GDXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR309GDX [biosample_summary="Homo sapiens heart left ventricle tissue male adult (61 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR309GDX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (61 years)
  • date_created: 2021-08-25T18:07:03.328535+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR309GDX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (61 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR309GDX float

Histone_ChIP-seq_ENCSR309GDX
Histone_ChIP-seq ENCSR309GDX [biosample_summary="Homo sapiens heart left ventricle tissue male adult (61 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR309GDX [1.5, 5.66]
n
1,858,252
mean
3.1
sd
0.524

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 18582520.06% 3789
chr1 113050 0.05% 248
chr2 114344 0.05% 254
chr3 97021 0.05% 220
chr4 111231 0.06% 225
chr5 129033 0.07% 272
chr6 58309 0.03% 143
chr7 96623 0.06% 205
chr8 71108 0.05% 152
chr9 83254 0.06% 180
chr10 74215 0.06% 156
chr11 63724 0.05% 142
chr12 104747 0.08% 209
chr13 44782 0.04% 101
chr14 45689 0.04% 107
chr15 60005 0.06% 135
chr16 58662 0.06% 107
chr17 26890 0.03% 47
chr18 33658 0.04% 77
chr19 397697 0.68% 643
chr20 21082 0.03% 49
chr21 28685 0.06% 60
chr22 19662 0.04% 43
chrX 2887 <0.01% 9
chrY 1894 <0.01% 5
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 3789 215 2996 490.43 412
global segment-length histogram

Files

Filename Size md5
ENCFF453TCJ.bed.gz 72.11 KB c5d513714b13ba941b7b3df39e885f37
ENCFF453TCJ.tabix.bed.gz 39.44 KB 4e0abf4c2adad4162e8fad8e0ebfb569
ENCFF453TCJ.tabix.bed.gz.tbi 33.77 KB 3e569ee8f4adc8b3adbdd3ea66ed11ec
genomic_resource.yaml 1.53 KB 0b816bae5c2fc80b5fd57d1b21853c0d
statistics/