Resource

Id Histone_ChIP-seq/ENCSR308PVPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR308PVP [biosample_summary="Homo sapiens BLaER1" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR308PVP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1
  • date_created: 2022-01-27T21:50:36.222122+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR308PVP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR308PVP float

Histone_ChIP-seq_ENCSR308PVP
Histone_ChIP-seq ENCSR308PVP [biosample_summary="Homo sapiens BLaER1" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR308PVP [1.24, 21.5]
n
144,783,351
mean
4.98
sd
2.46

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1447833514.50% 208698
chr1 9985960 4.01% 14463
chr1_KI270706v1_random 13068 7.47% 20
chr1_KI270707v1_random 2727 8.51% 6
chr1_KI270708v1_random 24664 19.32% 37
chr1_KI270709v1_random 19423 29.05% 23
chr1_KI270710v1_random 1249 3.11% 4
chr1_KI270712v1_random 5567 3.16% 5
chr1_KI270713v1_random 914 2.24% 2
chr1_KI270714v1_random 1342 3.22% 2
chr2 10998611 4.54% 16398
chr2_KI270716v1_random 8263 5.37% 4
chr3 8826900 4.45% 13585
chr3_GL000221v1_random 7329 4.72% 21
chr4 8031777 4.22% 12226
chr4_GL000008v2_random 11627 5.54% 14
chr5 8876205 4.89% 13274
chr5_GL000208v1_random 4146 4.47% 8
chr6 7139225 4.18% 11159
chr7 8936233 5.61% 12566
chr8 9343671 6.44% 12988
chr9 5383133 3.89% 8091
chr9_KI270719v1_random 4056 2.29% 5
chr9_KI270720v1_random 599 1.53% 2
chr10 7037428 5.26% 10189
chr11 5537852 4.10% 8059
chr12 6623374 4.97% 9310
chr13 4380679 3.83% 6960
chr14 4290930 4.01% 6324
chr14_GL000009v2_random 9281 4.60% 17
chr14_GL000194v1_random 12852 6.71% 15
chr14_GL000225v1_random 105832 50.12% 129
chr14_KI270722v1_random 22575 11.63% 41
chr14_KI270723v1_random 5457 14.32% 5
chr14_KI270724v1_random 5460 13.80% 7
chr14_KI270725v1_random 5027 2.91% 5
chr15 3860114 3.78% 5779
chr15_KI270727v1_random 411 0.09% 1
chr16 3758325 4.16% 5057
chr16_KI270728v1_random 42065 2.25% 62
chr17 3369756 4.05% 4471
chr17_GL000205v2_random 7534 4.06% 11
chr17_KI270729v1_random 202538 72.12% 49
chr17_KI270730v1_random 30722 27.30% 14
chr18 3295729 4.10% 5132
chr19 8037144 13.71% 7205
chr20 3005088 4.66% 4271
chr21 2408965 5.16% 3272
chr22 1670090 3.29% 2326
chr22_KI270731v1_random 710 0.47% 2
chr22_KI270732v1_random 3792 9.13% 5
chr22_KI270733v1_random 20184 11.23% 36
chr22_KI270735v1_random 5333 12.46% 3
chr22_KI270736v1_random 133174 73.20% 30
chr22_KI270737v1_random 54736 52.71% 53
chr22_KI270738v1_random 54506 54.85% 33
chrUn_GL000195v1 1147 0.63% 4
chrUn_GL000213v1 1857 1.13% 5
chrUn_GL000214v1 12045 8.75% 26
chrUn_GL000216v2 114817 65.01% 52
chrUn_GL000218v1 3407 2.11% 9
chrUn_GL000219v1 12073 6.74% 16
chrUn_GL000220v1 8385 5.18% 15
chrUn_GL000224v1 80052 44.55% 72
chrUn_KI270303v1 277 14.26% 1
chrUn_KI270317v1 250 0.66% 1
chrUn_KI270320v1 574 13.00% 2
chrUn_KI270322v1 1273 5.93% 4
chrUn_KI270330v1 399 24.15% 1
chrUn_KI270340v1 426 29.83% 1
chrUn_KI270435v1 15242 16.39% 31
chrUn_KI270438v1 71847 63.86% 28
chrUn_KI270442v1 133289 34.00% 80
chrUn_KI270448v1 277 3.47% 1
chrUn_KI270465v1 487 27.45% 1
chrUn_KI270468v1 678 16.72% 2
chrUn_KI270507v1 285 5.32% 1
chrUn_KI270508v1 1342 68.79% 2
chrUn_KI270509v1 553 23.86% 1
chrUn_KI270510v1 428 17.72% 1
chrUn_KI270511v1 315 3.88% 1
chrUn_KI270512v1 7569 33.36% 10
chrUn_KI270515v1 1362 21.41% 4
chrUn_KI270516v1 764 58.77% 1
chrUn_KI270517v1 474 14.57% 1
chrUn_KI270518v1 1194 54.62% 2
chrUn_KI270519v1 39620 28.68% 66
chrUn_KI270521v1 565 7.39% 1
chrUn_KI270538v1 2087 2.29% 4
chrUn_KI270580v1 895 57.63% 2
chrUn_KI270581v1 250 3.55% 1
chrUn_KI270583v1 522 37.29% 1
chrUn_KI270584v1 2269 50.28% 5
chrUn_KI270588v1 1159 18.82% 2
chrUn_KI270589v1 4544 10.22% 5
chrUn_KI270590v1 2189 46.72% 4
chrUn_KI270591v1 954 16.46% 1
chrUn_KI270741v1 3239 2.06% 8
chrUn_KI270742v1 3753 2.01% 9
chrUn_KI270743v1 7793 3.70% 15
chrUn_KI270744v1 20812 12.35% 28
chrUn_KI270745v1 303 0.72% 1
chrUn_KI270746v1 480 0.72% 1
chrUn_KI270747v1 3157 1.59% 4
chrUn_KI270749v1 5438 3.43% 7
chrUn_KI270750v1 2024 1.36% 4
chrUn_KI270751v1 10625 7.05% 19
chrUn_KI270753v1 4605 7.32% 8
chrUn_KI270754v1 18813 46.81% 14
chrUn_KI270755v1 284 0.77% 1
chrUn_KI270756v1 74548 93.67% 29
chrUn_KI270757v1 12018 16.87% 20
chrX 8222148 5.27% 13897
chrY 240817 0.42% 389
3253 contigs with no values (118629011 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 208698 250 57094 693.75 434
global segment-length histogram

Files

Filename Size md5
ENCFF248TMG.bed.gz 3.94 MB c0ae701aa38c21d93d942161929027a3
ENCFF248TMG.tabix.bed.gz 1.96 MB abe2d1859b436f5f1492fde6f1a5a020
ENCFF248TMG.tabix.bed.gz.tbi 523.46 KB 98d3b5d041712233a3a2004c88f5b18f
genomic_resource.yaml 2.56 KB dbfc6e090225e125214842a6c89cab14
statistics/