Resource

Id Histone_ChIP-seq/ENCSR297YOCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR297YOC [biosample_summary="Homo sapiens muscle layer of duodenum tissue male adult (59 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR297YOC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0012488/
  • biosample_summary: Homo sapiens muscle layer of duodenum tissue male adult (59 years)
  • date_created: 2015-09-15T19:52:36.737955+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR297YOC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR297YOC float

Histone_ChIP-seq_ENCSR297YOC
Histone_ChIP-seq ENCSR297YOC [biosample_summary="Homo sapiens muscle layer of duodenum tissue male adult (59 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR297YOC [1.79, 15]
n
68,107,551
mean
5.08
sd
1.47

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 681075512.12% 82706
chr1 7162936 2.88% 8304
chr2 5481100 2.26% 6718
chr3 4452507 2.25% 5442
chr4 2709287 1.42% 3583
chr5 3495192 1.93% 4337
chr6 3353429 1.96% 4122
chr7 2827448 1.77% 3546
chr8 2287241 1.58% 2932
chr9 3089249 2.23% 3680
chr10 3096288 2.31% 3855
chr11 3574784 2.65% 4215
chr12 3879863 2.91% 4590
chr13 1419773 1.24% 1856
chr14 2506902 2.34% 2988
chr15 2705190 2.65% 3311
chr16 2819248 3.12% 3316
chr17 3684160 4.43% 4292
chr18 1084090 1.35% 1436
chr19 2887812 4.93% 3508
chr20 2153282 3.34% 2452
chr21 838672 1.80% 1014
chr22 1679668 3.31% 1874
chrX 873679 0.56% 1267
chrY 45751 0.08% 68
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 82706 225 11247 823.49 650
global segment-length histogram

Files

Filename Size md5
ENCFF614PHD.bed.gz 1.66 MB bae190a8a42e9f24df0ee662dfcf7528
ENCFF614PHD.tabix.bed.gz 831.16 KB 6e2f705a1319dff1cf38c88f2e0cfbf1
ENCFF614PHD.tabix.bed.gz.tbi 155.6 KB 3bc96497ab844378a8edc0613f1a9c3d
genomic_resource.yaml 2.04 KB 29660eee761bc0130d00f106a25d74c4
statistics/