Resource
| Id | Histone_ChIP-seq/ENCSR295PSK |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR295PSK [biosample_summary="Homo sapiens B cell" and target="H3K9me3"] |
| Description |
status: released biological_replicates: Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN060YNB|/analyses/ENCAN060YNB/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR295PSK | float |
Histone_ChIP-seq_ENCSR295PSK |
Histone_ChIP-seq ENCSR295PSK [biosample_summary="Homo sapiens B cell" and target="H3K9me3"]
|
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[2.39, 11.6] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 7905407 | 0.25% | 42617 |
| chr1 | 699699 | 0.28% | 3986 |
| chr2 | 736112 | 0.30% | 4290 |
| chr3 | 615973 | 0.31% | 3714 |
| chr4 | 616310 | 0.32% | 3717 |
| chr5 | 317697 | 0.18% | 1429 |
| chr6 | 269750 | 0.16% | 1162 |
| chr7 | 254686 | 0.16% | 1083 |
| chr8 | 210338 | 0.14% | 943 |
| chr9 | 172900 | 0.12% | 718 |
| chr10 | 386856 | 0.29% | 2149 |
| chr11 | 377927 | 0.28% | 2262 |
| chr12 | 487219 | 0.37% | 2691 |
| chr13 | 321615 | 0.28% | 2011 |
| chr14 | 268006 | 0.25% | 1625 |
| chr15 | 236762 | 0.23% | 1347 |
| chr16 | 253786 | 0.28% | 1294 |
| chr17 | 187096 | 0.22% | 1008 |
| chr18 | 204323 | 0.25% | 1233 |
| chr19 | 873472 | 1.49% | 3625 |
| chr20 | 134609 | 0.21% | 777 |
| chr21 | 151490 | 0.32% | 885 |
| chr22 | 79115 | 0.16% | 434 |
| chrX | 36875 | 0.02% | 183 |
| chrY | 12791 | 0.02% | 51 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 42617 | 110 | 3049 | 185.5 | 138 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF570YTQ.bed.gz | 610.88 KB | 0c96c9ac4da84c1da18077b0cfc294bf |
| ENCFF570YTQ.tabix.bed.gz | 336.82 KB | 1dd67adef522e9d7293a581bf7ae5797 |
| ENCFF570YTQ.tabix.bed.gz.tbi | 211.49 KB | d0fd99419e81c64b90113e3cc9320561 |
| genomic_resource.yaml | 1.44 KB | 32de5aa47c5c542cc046801343fedd64 |
| statistics/ |
