Resource

Id Histone_ChIP-seq/ENCSR295PSKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR295PSK [biosample_summary="Homo sapiens B cell" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR295PSK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000236/
  • biosample_summary: Homo sapiens B cell
  • date_created: 2015-09-15T19:48:25.087230+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR295PSK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: anisogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment: Experiment 2538452f-d852-4deb-bd27-995aa1b09796 merged into base.
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR295PSK float

Histone_ChIP-seq_ENCSR295PSK

Histone_ChIP-seq ENCSR295PSK [biosample_summary="Homo sapiens B cell" and target="H3K9me3"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR295PSK [2.39, 11.6]
n
7,905,407
mean
3.74
sd
1.04

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 79054070.25% 42617
chr1 699699 0.28% 3986
chr2 736112 0.30% 4290
chr3 615973 0.31% 3714
chr4 616310 0.32% 3717
chr5 317697 0.18% 1429
chr6 269750 0.16% 1162
chr7 254686 0.16% 1083
chr8 210338 0.14% 943
chr9 172900 0.12% 718
chr10 386856 0.29% 2149
chr11 377927 0.28% 2262
chr12 487219 0.37% 2691
chr13 321615 0.28% 2011
chr14 268006 0.25% 1625
chr15 236762 0.23% 1347
chr16 253786 0.28% 1294
chr17 187096 0.22% 1008
chr18 204323 0.25% 1233
chr19 873472 1.49% 3625
chr20 134609 0.21% 777
chr21 151490 0.32% 885
chr22 79115 0.16% 434
chrX 36875 0.02% 183
chrY 12791 0.02% 51
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 42617 110 3049 185.5 138
global segment-length histogram

Files

Filename Size md5
ENCFF570YTQ.bed.gz 610.88 KB 0c96c9ac4da84c1da18077b0cfc294bf
ENCFF570YTQ.tabix.bed.gz 336.82 KB 1dd67adef522e9d7293a581bf7ae5797
ENCFF570YTQ.tabix.bed.gz.tbi 211.49 KB d0fd99419e81c64b90113e3cc9320561
genomic_resource.yaml 1.44 KB 32de5aa47c5c542cc046801343fedd64
statistics/