Resource

Id Histone_ChIP-seq/ENCSR286WURcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR286WUR [biosample_summary="Homo sapiens subcutaneous abdominal adipose tissue tissue nuclear fraction female adult (49 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR286WUR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0014455/
  • biosample_summary: Homo sapiens subcutaneous abdominal adipose tissue tissue nuclear fraction female adult (49 years)
  • date_created: 2015-09-15T19:52:47.263788+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR286WUR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (49 years) nuclear fraction
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR286WUR float

Histone_ChIP-seq_ENCSR286WUR
Histone_ChIP-seq ENCSR286WUR [biosample_summary="Homo sapiens subcutaneous abdominal adipose tissue tissue nuclear fraction female adult (49 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR286WUR [1.75, 23.9]
n
9,082,275
mean
4.91
sd
1.79

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 90822750.28% 21900
chr1 492488 0.20% 1310
chr2 475156 0.20% 1319
chr3 389693 0.20% 1040
chr4 414313 0.22% 1055
chr5 625943 0.34% 1475
chr6 296035 0.17% 846
chr7 559374 0.35% 1364
chr8 390738 0.27% 1065
chr9 311190 0.22% 756
chr10 406140 0.30% 1048
chr11 346273 0.26% 953
chr12 474612 0.36% 1102
chr13 157303 0.14% 469
chr14 172141 0.16% 504
chr15 233269 0.23% 538
chr16 342916 0.38% 809
chr17 152277 0.18% 401
chr18 145105 0.18% 412
chr19 1731676 2.95% 2796
chr20 158905 0.25% 423
chr21 159119 0.34% 338
chr22 77516 0.15% 210
chrM 486 2.93% 1
chrX 559705 0.36% 1644
chrY 9902 0.02% 22
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 21900 170 12924 414.72 321
global segment-length histogram

Files

Filename Size md5
ENCFF424IUU.bed.gz 400.03 KB 08259e339430fa6b6b5e1b4057ef3730
ENCFF424IUU.tabix.bed.gz 211.39 KB 95426a61868156808cd7e44d1b0dd121
ENCFF424IUU.tabix.bed.gz.tbi 120.68 KB c6cc30ee69c7cadec1cab5adebd44f79
genomic_resource.yaml 1.67 KB ba2829da69e4f78d77b049b0896a8099
statistics/