Resource

Id Histone_ChIP-seq/ENCSR283STFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR283STF [biosample_summary="Homo sapiens IMR-90" and target="H3K14ac"]
Description
Labels
  • accession: ENCSR283STF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001196/
  • biosample_summary: Homo sapiens IMR-90
  • date_created: 2015-10-01T07:15:56.021138+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR283STF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K14ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR283STF float

Histone_ChIP-seq_ENCSR283STF
Histone_ChIP-seq ENCSR283STF [biosample_summary="Homo sapiens IMR-90" and target="H3K14ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR283STF [1.61, 26.5]
n
71,174,851
mean
5.83
sd
2.57

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 711748512.21% 172113
chr1 6471463 2.60% 15322
chr2 6506882 2.69% 15703
chr3 4570743 2.31% 11269
chr4 3058593 1.61% 8227
chr5 4327778 2.38% 10506
chr6 4156421 2.43% 10759
chr7 3410181 2.14% 8609
chr8 3401246 2.34% 8645
chr9 3179265 2.30% 7496
chr10 3356991 2.51% 8170
chr11 4137642 3.06% 9459
chr12 3754029 2.82% 9098
chr13 1861979 1.63% 4871
chr14 2229555 2.08% 5282
chr15 2970994 2.91% 6891
chr16 2204024 2.44% 4871
chr17 3335012 4.01% 7213
chr18 1608542 2.00% 4221
chr19 1863396 3.18% 4180
chr20 1810810 2.81% 4141
chr21 924354 1.98% 2275
chr22 1287992 2.53% 2848
chrX 746959 0.48% 2057
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 172113 115 6835 413.54 317
global segment-length histogram

Files

Filename Size md5
ENCFF532BEE.bed.gz 3.98 MB beefb715e850c0c233ab6a9f3ac23757
ENCFF532BEE.tabix.bed.gz 1.73 MB 2a88775fa1796dff57c83fbfc256a2f7
ENCFF532BEE.tabix.bed.gz.tbi 331.9 KB c2c64b0a0f6b57a6fad02b4fda3737c3
genomic_resource.yaml 2.09 KB ceb94cf911365b1facb6e0ddbec989c3
statistics/