Resource

Id Histone_ChIP-seq/ENCSR283BRUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR283BRU [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (51 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR283BRU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0011907/
  • biosample_summary: Homo sapiens gastrocnemius medialis tissue female adult (51 years)
  • date_created: 2017-12-06T21:00:35.141791+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR283BRU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR283BRU float

Histone_ChIP-seq_ENCSR283BRU
Histone_ChIP-seq ENCSR283BRU [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (51 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR283BRU [1.36, 6.81]
n
7,733,884
mean
3.03
sd
0.674

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 77338840.24% 18899
chr1 413020 0.17% 1112
chr2 420499 0.17% 1203
chr3 352722 0.18% 987
chr4 410838 0.22% 1057
chr5 486039 0.27% 1245
chr6 303147 0.18% 879
chr7 406730 0.26% 1023
chr8 288612 0.20% 820
chr9 262571 0.19% 616
chr10 294074 0.22% 789
chr11 247481 0.18% 714
chr12 402106 0.30% 883
chr13 130861 0.11% 405
chr14 160338 0.15% 432
chr15 180051 0.18% 420
chr16 267859 0.30% 611
chr17 115453 0.14% 287
chr18 122386 0.15% 361
chr19 1615144 2.76% 2544
chr20 102084 0.16% 286
chr21 114420 0.24% 294
chr22 62306 0.12% 167
chrM 11083 66.89% 14
chrX 557540 0.36% 1730
chrY 6520 0.01% 20
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 18899 135 7581 409.22 310
global segment-length histogram

Files

Filename Size md5
ENCFF707WWV.bed.gz 362.28 KB a1b13f286097fedb9763411bb967b8ee
ENCFF707WWV.tabix.bed.gz 186.86 KB ef10f3345d92ece2abe110c43e413f48
ENCFF707WWV.tabix.bed.gz.tbi 114.24 KB da90465a5ffbd563d6443906e3d543e1
genomic_resource.yaml 1.54 KB b9a821d9f6fb5cffe78336b86b8739ca
statistics/