Resource

Id Histone_ChIP-seq/ENCSR281JVNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR281JVN [biosample_summary="Homo sapiens right lobe of liver tissue female adult (41 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR281JVN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001114/
  • biosample_summary: Homo sapiens right lobe of liver tissue female adult (41 years)
  • date_created: 2022-05-11T01:54:28.411913+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR281JVN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR281JVN float

Histone_ChIP-seq_ENCSR281JVN

Histone_ChIP-seq ENCSR281JVN [biosample_summary="Homo sapiens right lobe of liver tissue female adult (41 years)" and target="H3K9me3"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR281JVN [1.95, 4.15]
n
247,432
mean
3.02
sd
0.41

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2474320.01% 643
chr1 12488 0.01% 38
chr2 17950 0.01% 47
chr3 11339 0.01% 32
chr4 19474 0.01% 53
chr5 13631 0.01% 37
chr6 13017 0.01% 35
chr7 15420 0.01% 37
chr8 9787 0.01% 23
chr9 11679 0.01% 27
chr10 6217 <0.01% 19
chr11 9546 0.01% 28
chr12 15077 0.01% 33
chr13 6816 0.01% 21
chr14 4716 <0.01% 14
chr15 4848 <0.01% 14
chr16 6190 0.01% 17
chr17 3894 <0.01% 10
chr18 3962 <0.01% 10
chr19 41263 0.07% 88
chr20 2561 <0.01% 9
chr21 3129 0.01% 8
chr22 566 <0.01% 2
chrX 13862 0.01% 41
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 643 195 1622 384.81 341
global segment-length histogram

Files

Filename Size md5
ENCFF681HRQ.bed.gz 13.53 KB 0eab5fbf89f6c93799e984c403f12b56
ENCFF681HRQ.tabix.bed.gz 6.99 KB 83e10f49658cca19dd96f7ad3a35e647
ENCFF681HRQ.tabix.bed.gz.tbi 11.03 KB fcca721c00e9db60106449bb70ce720d
genomic_resource.yaml 1.53 KB 852bfb8ddec2238fc0f52b22a004bd8b
statistics/