Resource

Id Histone_ChIP-seq/ENCSR279MCNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR279MCN [biosample_summary="Homo sapiens esophagus tissue female adult (30 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR279MCN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001043/
  • biosample_summary: Homo sapiens esophagus tissue female adult (30 years)
  • date_created: 2015-10-01T07:17:01.969460+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR279MCN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (30 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR279MCN float

Histone_ChIP-seq_ENCSR279MCN
Histone_ChIP-seq ENCSR279MCN [biosample_summary="Homo sapiens esophagus tissue female adult (30 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR279MCN [1.89, 10.6]
n
17,143,483
mean
4.45
sd
0.979

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 171434830.53% 38107
chr1 1768856 0.71% 3951
chr2 1156624 0.48% 2800
chr3 978422 0.49% 2247
chr4 513832 0.27% 1292
chr5 672368 0.37% 1648
chr6 714229 0.42% 1663
chr7 737568 0.46% 1680
chr8 499651 0.34% 1214
chr9 867633 0.63% 1918
chr10 710193 0.53% 1623
chr11 927587 0.69% 1988
chr12 990150 0.74% 2144
chr13 262578 0.23% 694
chr14 555538 0.52% 1301
chr15 605361 0.59% 1404
chr16 935201 1.04% 1906
chr17 1153529 1.39% 2400
chr18 227000 0.28% 569
chr19 1353708 2.31% 2513
chr20 609564 0.95% 1302
chr21 201353 0.43% 441
chr22 585682 1.15% 1113
chrX 116856 0.07% 296
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 38107 180 3594 449.88 379
global segment-length histogram

Files

Filename Size md5
ENCFF389ELB.bed.gz 734.76 KB 920e47565b8b2e05a006120364299118
ENCFF389ELB.tabix.bed.gz 375.06 KB 8444c4c172192965973c58aa93aff73e
ENCFF389ELB.tabix.bed.gz.tbi 137.27 KB 42d024ff0efc40606a7446581b907ae4
genomic_resource.yaml 2.21 KB 09167d017c5eb303db9978494b2a3b98
statistics/