Resource

Id Histone_ChIP-seq/ENCSR278TQEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR278TQE [biosample_summary="Homo sapiens vagina tissue female adult (51 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR278TQE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000996/
  • biosample_summary: Homo sapiens vagina tissue female adult (51 years)
  • date_created: 2019-08-23T14:01:26.181409+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR278TQE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR278TQE float

Histone_ChIP-seq_ENCSR278TQE
Histone_ChIP-seq ENCSR278TQE [biosample_summary="Homo sapiens vagina tissue female adult (51 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR278TQE [1.81, 6.13]
n
2,009,040
mean
3.45
sd
0.627

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 20090400.06% 2776
chr1 185170 0.07% 252
chr2 175631 0.07% 226
chr3 64061 0.03% 98
chr4 79675 0.04% 115
chr5 102149 0.06% 140
chr6 106427 0.06% 147
chr7 103394 0.06% 143
chr8 85456 0.06% 110
chr9 107223 0.08% 141
chr10 120502 0.09% 159
chr11 79250 0.06% 121
chr12 83906 0.06% 116
chr13 63062 0.06% 75
chr14 64021 0.06% 78
chr15 57971 0.06% 79
chr16 58787 0.07% 88
chr17 135386 0.16% 179
chr18 25056 0.03% 42
chr19 142312 0.24% 197
chr20 77431 0.12% 108
chr21 23398 0.05% 32
chr22 35206 0.07% 59
chrX 33566 0.02% 71
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2776 225 3267 723.72 616
global segment-length histogram

Files

Filename Size md5
ENCFF866QFX.bed.gz 53.74 KB 810c2cda0eaaf0f34dd691a57e5356c4
ENCFF866QFX.tabix.bed.gz 28.92 KB 7fcb236fefe5ba08711b1e470c016433
ENCFF866QFX.tabix.bed.gz.tbi 21.28 KB e7209166d6db91d42b2c065209a66c83
genomic_resource.yaml 1.71 KB 66cd835841017658b0360bd0c49321ed
statistics/