Resource

Id Histone_ChIP-seq/ENCSR276ZSLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR276ZSL [biosample_summary="Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR276ZSL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000895/
  • biosample_summary: Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell
  • date_created: 2015-09-15T19:48:36.090797+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR276ZSL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR276ZSL float

Histone_ChIP-seq_ENCSR276ZSL
Histone_ChIP-seq ENCSR276ZSL [biosample_summary="Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR276ZSL [1.88, 8.33]
n
1,068,418
mean
4.29
sd
0.961

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 10684180.03% 1733
chr1 44240 0.02% 81
chr2 54159 0.02% 102
chr3 49010 0.02% 87
chr4 62840 0.03% 114
chr5 42898 0.02% 79
chr6 22958 0.01% 48
chr7 59407 0.04% 93
chr8 33207 0.02% 58
chr9 35363 0.03% 66
chr10 27631 0.02% 52
chr11 28755 0.02% 59
chr12 60786 0.05% 93
chr13 17605 0.02% 40
chr14 14391 0.01% 30
chr15 23820 0.02% 38
chr16 39714 0.04% 63
chr17 20579 0.02% 35
chr18 18811 0.02% 35
chr19 368040 0.63% 480
chr20 11407 0.02% 20
chr21 14734 0.03% 27
chr22 8739 0.02% 15
chrX 5061 <0.01% 10
chrY 4263 0.01% 8
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1733 230 4654 616.51 503
global segment-length histogram

Files

Filename Size md5
ENCFF533LAL.bed.gz 36.25 KB c6e92f0e2f4a34bb54ae635678b807ea
ENCFF533LAL.tabix.bed.gz 18.59 KB 54addfd07a19c39d4feaecb8ca8561e8
ENCFF533LAL.tabix.bed.gz.tbi 17.16 KB ba76572137828bde0b07cefc1dc9b8f9
genomic_resource.yaml 1.51 KB ac5f06d047f5d09cfd6c0d064cecf93e
statistics/