Resource

Id Histone_ChIP-seq/ENCSR276MDPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR276MDP [biosample_summary="Homo sapiens ovary tissue female adult (41 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR276MDP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000992/
  • biosample_summary: Homo sapiens ovary tissue female adult (41 years)
  • date_created: 2022-05-11T01:55:09.514783+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR276MDP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR276MDP float

Histone_ChIP-seq_ENCSR276MDP
Histone_ChIP-seq ENCSR276MDP [biosample_summary="Homo sapiens ovary tissue female adult (41 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR276MDP [2.2, 5.47]
n
338,801
mean
3.51
sd
0.538

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3388010.01% 877
chr1 14779 0.01% 42
chr2 22562 0.01% 62
chr3 16401 0.01% 47
chr4 16525 0.01% 44
chr5 22653 0.01% 57
chr6 15093 0.01% 44
chr7 17960 0.01% 51
chr8 15618 0.01% 43
chr9 18209 0.01% 44
chr10 19904 0.01% 54
chr11 11957 0.01% 30
chr12 12088 0.01% 31
chr13 6291 0.01% 16
chr14 7420 0.01% 19
chr15 10970 0.01% 28
chr16 13871 0.02% 32
chr17 10298 0.01% 28
chr18 7638 0.01% 21
chr19 53172 0.09% 113
chr20 5975 0.01% 17
chr21 3183 0.01% 10
chr22 6046 0.01% 16
chrX 10188 0.01% 28
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 877 200 1516 386.32 349
global segment-length histogram

Files

Filename Size md5
ENCFF478JCP.bed.gz 18.45 KB 24b0365c9edb76d1d89c76d20f42fa49
ENCFF478JCP.tabix.bed.gz 9.52 KB e9a98960c81e21ed7910ed6eeb8af09e
ENCFF478JCP.tabix.bed.gz.tbi 13.62 KB d77ab98555ab4545cf2dfee866858820
genomic_resource.yaml 1.99 KB 1984918f1245c9f50675c49b26ee8457
statistics/