Resource

Id Histone_ChIP-seq/ENCSR276BXFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR276BXF [biosample_summary="Homo sapiens mucosa of rectum tissue female adult (50 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR276BXF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0003346/
  • biosample_summary: Homo sapiens mucosa of rectum tissue female adult (50 years)
  • date_created: 2016-03-03T20:36:47.164329+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR276BXF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (50 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR276BXF float

Histone_ChIP-seq_ENCSR276BXF
Histone_ChIP-seq ENCSR276BXF [biosample_summary="Homo sapiens mucosa of rectum tissue female adult (50 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR276BXF [1.81, 91.1]
n
53,927,985
mean
23.8
sd
17.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 539279851.68% 53273
chr1 5426268 2.18% 5222
chr2 3801833 1.57% 3784
chr3 3103910 1.57% 2988
chr4 2283728 1.20% 2204
chr5 2589948 1.43% 2440
chr6 3211768 1.88% 2986
chr7 2662345 1.67% 2670
chr8 1959975 1.35% 1955
chr9 2207095 1.59% 2288
chr10 2309281 1.73% 2348
chr11 2889437 2.14% 2795
chr12 2882567 2.16% 2688
chr13 1144117 1.00% 1142
chr14 1823270 1.70% 1779
chr15 1800880 1.77% 1759
chr16 2079843 2.30% 2175
chr17 3079802 3.70% 3047
chr18 923007 1.15% 987
chr19 3254984 5.55% 3407
chr20 1376929 2.14% 1403
chr21 569792 1.22% 607
chr22 1151586 2.27% 1192
chrX 1395620 0.89% 1407
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 53273 160 12701 1012.29 634
global segment-length histogram

Files

Filename Size md5
ENCFF455YSO.bed.gz 1.18 MB 8305990165ced50306920fa1d99544a2
ENCFF455YSO.tabix.bed.gz 559.33 KB 7e998b1a54bee7fca26680f927ff9d06
ENCFF455YSO.tabix.bed.gz.tbi 220.47 KB e1e80b0bcc39a61add22aef06d94b964
genomic_resource.yaml 1.52 KB a29f20d30324679aee8ed682cab3fc9b
statistics/