Resource

Id Histone_ChIP-seq/ENCSR275DXOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR275DXO [biosample_summary="Homo sapiens liver tissue male adult (78 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR275DXO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002107/
  • biosample_summary: Homo sapiens liver tissue male adult (78 years)
  • date_created: 2015-09-15T19:52:14.496163+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR275DXO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (78 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR275DXO float

Histone_ChIP-seq_ENCSR275DXO
Histone_ChIP-seq ENCSR275DXO [biosample_summary="Homo sapiens liver tissue male adult (78 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR275DXO [1.82, 9.79]
n
17,122,733
mean
4.39
sd
0.957

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 171227330.53% 47466
chr1 1331203 0.53% 3630
chr2 1348210 0.56% 3728
chr3 989987 0.50% 2812
chr4 1035662 0.54% 3051
chr5 1063962 0.59% 2981
chr6 1087554 0.64% 2886
chr7 858110 0.54% 2340
chr8 936295 0.65% 2678
chr9 722794 0.52% 1977
chr10 920890 0.69% 2512
chr11 836323 0.62% 2266
chr12 908695 0.68% 2475
chr13 642233 0.56% 1856
chr14 569241 0.53% 1590
chr15 656139 0.64% 1781
chr16 500498 0.55% 1429
chr17 725772 0.87% 1888
chr17_GL000205v2_random 12926 6.96% 18
chr18 358782 0.45% 1098
chr19 357513 0.61% 985
chr20 694961 1.08% 1869
chr21 234770 0.50% 658
chr22 259609 0.51% 727
chrUn_GL000219v1 6808 3.80% 10
chrUn_GL000224v1 201 0.11% 1
chrUn_KI270751v1 322 0.21% 1
chrX 62186 0.04% 216
chrY 1087 <0.01% 3
3338 contigs with no values (128381861 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 47466 165 2661 360.74 315
global segment-length histogram

Files

Filename Size md5
ENCFF639EHI.bed.gz 837.63 KB e00e7c356c1e64c9d13040118cd5e39d
ENCFF639EHI.tabix.bed.gz 443.36 KB c7ba360fcc286f9c32d96c88d835d632
ENCFF639EHI.tabix.bed.gz.tbi 218.16 KB 8b395448adf936eb127f6fa253de61a3
genomic_resource.yaml 1.98 KB afdc53d78daef97424db963ca0e6e12b
statistics/