Resource

Id Histone_ChIP-seq/ENCSR273TNGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR273TNG [biosample_summary="Homo sapiens colonic mucosa tissue female adult (73 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR273TNG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000317/
  • biosample_summary: Homo sapiens colonic mucosa tissue female adult (73 years)
  • date_created: 2015-09-15T19:51:45.250891+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR273TNG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (73 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR273TNG float

Histone_ChIP-seq_ENCSR273TNG
Histone_ChIP-seq ENCSR273TNG [biosample_summary="Homo sapiens colonic mucosa tissue female adult (73 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR273TNG [1.64, 24.3]
n
39,172,170
mean
6.38
sd
2.59

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 391721701.22% 74400
chr1 4090660 1.64% 7667
chr2 2591541 1.07% 5257
chr3 1840880 0.93% 3750
chr4 963917 0.51% 2016
chr5 1569386 0.86% 3122
chr6 1549914 0.91% 3252
chr7 1617620 1.02% 3268
chr8 1264246 0.87% 2519
chr9 2006094 1.45% 3599
chr10 1864634 1.39% 3633
chr11 2576424 1.91% 4562
chr12 1740755 1.31% 3363
chr13 528432 0.46% 1164
chr14 1436220 1.34% 2614
chr15 1352663 1.33% 2656
chr16 2129314 2.36% 3759
chr17 3092568 3.71% 5286
chr18 507150 0.63% 1138
chr19 2775519 4.73% 4724
chr20 1298651 2.02% 2526
chr21 504253 1.08% 1012
chr22 1460527 2.87% 2538
chrX 410431 0.26% 974
chrY 371 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 74400 170 10130 526.51 409
global segment-length histogram

Files

Filename Size md5
ENCFF126QBU.bed.gz 1.41 MB d12f6228f06a38c3e86eb9783245950d
ENCFF126QBU.tabix.bed.gz 721.57 KB 4e302f576ac167f9b77e831e24c1e29e
ENCFF126QBU.tabix.bed.gz.tbi 232.6 KB edb59e4fc782e9f1a3a6dc25023f5003
genomic_resource.yaml 2.01 KB 734d171eb2030ecf9fe26f43accbd663
statistics/