Resource
| Id | Histone_ChIP-seq/ENCSR266SKT |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR266SKT [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H4K20me1"] |
| Description |
status: released biological_replicates: Rep 1 summary: 6 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR266SKT | float |
Histone_ChIP-seq_ENCSR266SKT |
Histone_ChIP-seq ENCSR266SKT [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H4K20me1"]
|
 |
[1.25, 34.6] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 167205231 | 5.20% | 148928 |
| chr1 | 15787853 | 6.34% | 14052 |
| chr1_KI270712v1_random | 2878 | 1.63% | 7 |
| chr1_KI270713v1_random | 1816 | 4.46% | 5 |
| chr2 | 11794113 | 4.87% | 10391 |
| chr3 | 9051555 | 4.56% | 8385 |
| chr4 | 5584193 | 2.94% | 5408 |
| chr5 | 8001987 | 4.41% | 7361 |
| chr6 | 7142960 | 4.18% | 7251 |
| chr7 | 9470781 | 5.94% | 8778 |
| chr8 | 8027745 | 5.53% | 6551 |
| chr9 | 7453942 | 5.39% | 6324 |
| chr10 | 8288817 | 6.20% | 7860 |
| chr11 | 7910387 | 5.86% | 6927 |
| chr12 | 7825413 | 5.87% | 7069 |
| chr13 | 3175675 | 2.78% | 2990 |
| chr14 | 5102461 | 4.77% | 4613 |
| chr14_GL000194v1_random | 2406 | 1.26% | 5 |
| chr15 | 4977877 | 4.88% | 4998 |
| chr16 | 8719431 | 9.65% | 6841 |
| chr17 | 10295741 | 12.37% | 8811 |
| chr18 | 3031301 | 3.77% | 2998 |
| chr19 | 8643470 | 14.75% | 5974 |
| chr20 | 5239728 | 8.13% | 4283 |
| chr21 | 2223230 | 4.76% | 1885 |
| chr22 | 5667439 | 11.15% | 4479 |
| chr22_KI270733v1_random | 269 | 0.15% | 1 |
| chrUn_GL000219v1 | 3132 | 1.75% | 7 |
| chrUn_KI270438v1 | 822 | 0.73% | 3 |
| chrX | 3776189 | 2.42% | 4669 |
| chrY | 1620 | <0.01% | 2 |
| 3336 contigs with no values (128197353 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 148928 | 250 | 183923 | 1122.73 | 481 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF218EJF.bed.gz | 2.87 MB | 255a06efcd4ceb944dce098eeee95df2 |
| ENCFF218EJF.tabix.bed.gz | 1.41 MB | cbedeafb554c093a730e4be4c11023b2 |
| ENCFF218EJF.tabix.bed.gz.tbi | 179.3 KB | ad0519452bace8bfce2aaaf36d7a0c50 |
| genomic_resource.yaml | 3.12 KB | 681abfa74a951144ed839879e1d8597c |
| statistics/ |