Resource

Id Histone_ChIP-seq/ENCSR266RKEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR266RKE [biosample_summary="Homo sapiens BLaER1 3 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR266RKE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 3 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:04.941725+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR266RKE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 3 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR266RKE float

Histone_ChIP-seq_ENCSR266RKE
Histone_ChIP-seq ENCSR266RKE [biosample_summary="Homo sapiens BLaER1 3 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR266RKE [1.18, 32.1]
n
101,971,629
mean
7.42
sd
4.61

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1019716293.17% 61425
chr1 2584074 1.04% 1838
chr1_KI270709v1_random 697 1.04% 2
chr1_KI270710v1_random 306 0.76% 1
chr1_KI270712v1_random 23573 13.39% 21
chr1_KI270713v1_random 7445 18.27% 9
chr1_KI270714v1_random 5173 12.40% 11
chr2 2081482 0.86% 1359
chr3 1138854 0.57% 861
chr4 833152 0.44% 599
chr5 1208079 0.67% 784
chr6 1453494 0.85% 947
chr7 1270396 0.80% 868
chr8 1130353 0.78% 873
chr9 1099498 0.79% 738
chr9_KI270717v1_random 800 2.00% 3
chr10 1268545 0.95% 805
chr11 1343838 0.99% 865
chr12 1341427 1.01% 779
chr13 590038 0.52% 383
chr14 707519 0.66% 459
chr14_GL000009v2_random 1080 0.54% 2
chr14_KI270725v1_random 515 0.30% 2
chr15 880654 0.86% 550
chr16 972584 1.08% 639
chr16_KI270728v1_random 250 0.01% 1
chr17 1727121 2.07% 1124
chr17_GL000205v2_random 360 0.19% 1
chr17_KI270729v1_random 254 0.09% 1
chr18 341772 0.43% 284
chr19 1070696 1.83% 747
chr20 761949 1.18% 510
chr21 269319 0.58% 222
chr22 663732 1.31% 465
chr22_KI270733v1_random 7312 4.07% 14
chrM 2065 12.46% 4
chrUn_GL000219v1 443 0.25% 1
chrUn_GL000220v1 726 0.45% 2
chrUn_KI270435v1 253 0.27% 1
chrUn_KI270438v1 2923 2.60% 4
chrUn_KI270442v1 250 0.06% 1
chrUn_KI270744v1 917 0.54% 3
chrUn_KI270747v1 250 0.13% 1
chrX 77174196 49.46% 44630
chrY 3265 0.01% 11
3322 contigs with no values (124455677 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 61425 250 47964 1660.1 698
global segment-length histogram

Files

Filename Size md5
ENCFF166JAL.bed.gz 1.22 MB 709d6230c7826547ee19cbf9e27069c1
ENCFF166JAL.tabix.bed.gz 605.13 KB b947b65f660967af0bcb7fcb57358ddf
ENCFF166JAL.tabix.bed.gz.tbi 99.82 KB 61116f2b1120a48c5cb8ef210a7c9548
genomic_resource.yaml 3.12 KB 9625dcd5c3fab76a210ed9e89d9326c5
statistics/