Resource

Id Histone_ChIP-seq/ENCSR264YGMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR264YGM [biosample_summary="Homo sapiens caudate nucleus tissue female adult (75 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR264YGM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001873/
  • biosample_summary: Homo sapiens caudate nucleus tissue female adult (75 years)
  • date_created: 2015-09-15T19:52:05.295444+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR264YGM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR264YGM float

Histone_ChIP-seq_ENCSR264YGM
Histone_ChIP-seq ENCSR264YGM [biosample_summary="Homo sapiens caudate nucleus tissue female adult (75 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR264YGM [1.71, 16.6]
n
53,506,694
mean
4.9
sd
1.54

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 535066941.66% 107895
chr1 5691988 2.29% 10999
chr2 4152587 1.71% 8419
chr3 3393781 1.71% 7045
chr4 2040323 1.07% 4398
chr5 2855889 1.57% 5856
chr6 2937601 1.72% 6192
chr7 2421397 1.52% 5105
chr8 2037100 1.40% 4384
chr9 2678340 1.94% 5248
chr10 3101684 2.32% 6079
chr11 3472756 2.57% 6816
chr12 2344435 1.76% 4879
chr13 1137597 0.99% 2386
chr14 1980892 1.85% 3898
chr15 1954283 1.92% 3899
chr16 1879249 2.08% 3730
chr17 2915807 3.50% 5453
chr18 1136775 1.41% 2402
chr19 1592428 2.72% 3097
chr20 1562956 2.43% 3053
chr21 554479 1.19% 1166
chr22 1344032 2.64% 2553
chrX 320315 0.21% 838
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 107895 165 8999 495.91 392
global segment-length histogram

Files

Filename Size md5
ENCFF758QYH.bed.gz 2.06 MB 2d8b61b14803a1e9903f38b55a87db99
ENCFF758QYH.tabix.bed.gz 1.04 MB f8f6f91505ac004774d3f71e99a9ed2e
ENCFF758QYH.tabix.bed.gz.tbi 305.88 KB 584f04b5968d9a23267206aeaaf2a7b3
genomic_resource.yaml 2.01 KB edbf3658506c0cc193c47e58a952b301
statistics/