Resource

Id Histone_ChIP-seq/ENCSR263XKRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR263XKR [biosample_summary="Homo sapiens breast epithelium tissue female adult (51 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR263XKR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008367/
  • biosample_summary: Homo sapiens breast epithelium tissue female adult (51 years)
  • date_created: 2019-07-29T21:15:34.326779+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR263XKR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR263XKR float

Histone_ChIP-seq_ENCSR263XKR
Histone_ChIP-seq ENCSR263XKR [biosample_summary="Homo sapiens breast epithelium tissue female adult (51 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR263XKR [1.2, 8.46]
n
25,799,085
mean
3.52
sd
0.707

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 257990850.80% 35527
chr1 2877245 1.16% 3866
chr2 1835510 0.76% 2610
chr3 1530615 0.77% 2176
chr4 702666 0.37% 1054
chr5 1136954 0.63% 1637
chr6 1117192 0.65% 1686
chr7 985852 0.62% 1463
chr8 945401 0.65% 1387
chr9 1224653 0.88% 1600
chr10 1314339 0.98% 1825
chr11 1644777 1.22% 2172
chr12 1303880 0.98% 1769
chr13 400895 0.35% 619
chr14 996657 0.93% 1311
chr15 938938 0.92% 1302
chr16 1106181 1.22% 1472
chr17 1856897 2.23% 2370
chr18 383075 0.48% 612
chr19 1452649 2.48% 1835
chr20 809107 1.26% 1100
chr21 266706 0.57% 385
chr22 888439 1.75% 1124
chrUn_KI270467v1 1280 32.65% 2
chrX 79177 0.05% 150
3342 contigs with no values (186300580 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 35527 210 7410 726.18 611
global segment-length histogram

Files

Filename Size md5
ENCFF358IHN.bed.gz 641.22 KB 753f783c5838cb52dddf8bcd0db72299
ENCFF358IHN.tabix.bed.gz 345.95 KB 0b6054dfca4d0bbaaf001c16853f172e
ENCFF358IHN.tabix.bed.gz.tbi 164.57 KB e5791a8b7af38072e3f8e83d686649a7
genomic_resource.yaml 1.53 KB f7074bcb0ac88b38e4edf71f8024d1e8
statistics/