Resource

Id Histone_ChIP-seq/ENCSR262LFGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR262LFG [biosample_summary="Homo sapiens spinal cord tissue female embryo (108 days)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR262LFG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002240/
  • biosample_summary: Homo sapiens spinal cord tissue female embryo (108 days)
  • date_created: 2015-09-16T21:42:55.668433+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR262LFG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (108 days)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR262LFG float

Histone_ChIP-seq_ENCSR262LFG
Histone_ChIP-seq ENCSR262LFG [biosample_summary="Homo sapiens spinal cord tissue female embryo (108 days)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR262LFG [1.6, 19.2]
n
15,276,260
mean
4.65
sd
1.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 152762600.47% 56354
chr1 1002046 0.40% 3704
chr2 1232455 0.51% 4561
chr3 985314 0.50% 3687
chr4 1043379 0.55% 3903
chr5 1049037 0.58% 3710
chr6 853882 0.50% 3243
chr7 892278 0.56% 3324
chr8 864958 0.60% 3216
chr9 562144 0.41% 2054
chr10 647724 0.48% 2437
chr11 713704 0.53% 2671
chr12 797361 0.60% 2839
chr13 495439 0.43% 1889
chr14 534296 0.50% 1986
chr15 397508 0.39% 1471
chr16 373843 0.41% 1359
chr17 276427 0.33% 1018
chr18 367518 0.46% 1356
chr19 840167 1.43% 2572
chr20 249118 0.39% 960
chr21 255273 0.55% 892
chr22 161165 0.32% 584
chrX 680000 0.44% 2910
chrY 1224 <0.01% 8
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 56354 105 3139 271.08 227
global segment-length histogram

Files

Filename Size md5
ENCFF674GTJ.bed.gz 935.82 KB 8443d5fc0a1d003de629303f643524b1
ENCFF674GTJ.tabix.bed.gz 500.63 KB b7c4e631a8089645b0d1a24bbd7ffa24
ENCFF674GTJ.tabix.bed.gz.tbi 270.52 KB 1294e2d192e6d69ac40e92568cc88b82
genomic_resource.yaml 2.22 KB 1f968803dc31e65561bb1de717da8b54
statistics/