Resource

Id Histone_ChIP-seq/ENCSR258ORJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR258ORJ [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (39 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR258ORJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell male adult (39 years)
  • date_created: 2017-03-22T16:16:55.074539+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR258ORJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (39 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR258ORJ float

Histone_ChIP-seq_ENCSR258ORJ
Histone_ChIP-seq ENCSR258ORJ [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (39 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR258ORJ [1.56, 8.63]
n
411,327
mean
4.18
sd
0.945

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 4113270.01% 976
chr1 18805 0.01% 47
chr2 20522 0.01% 57
chr3 16515 0.01% 46
chr4 19924 0.01% 53
chr5 21473 0.01% 54
chr6 8439 <0.01% 24
chr7 15001 0.01% 41
chr8 13430 0.01% 36
chr9 13929 0.01% 35
chr10 8458 0.01% 19
chr11 10648 0.01% 29
chr12 28137 0.02% 69
chr13 7887 0.01% 25
chr14 7881 0.01% 22
chr15 13858 0.01% 31
chr16 16257 0.02% 37
chr17 6682 0.01% 18
chr18 4758 0.01% 14
chr19 135383 0.23% 263
chr20 5788 0.01% 16
chr21 13881 0.03% 30
chr22 1746 <0.01% 5
chrX 1415 <0.01% 4
chrY 510 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 976 195 2529 421.44 363
global segment-length histogram

Files

Filename Size md5
ENCFF021VTR.bed.gz 18.11 KB fc8416ddc0ddb2e1f692cf0fa99a2ccb
ENCFF021VTR.tabix.bed.gz 9.85 KB 4ab3c78889079be638ab239e39ae7e82
ENCFF021VTR.tabix.bed.gz.tbi 12.96 KB c816aee05cb729ef7baac2b5e62cb0dc
genomic_resource.yaml 1.55 KB 23e0eba7770181a6ddd34edb9a483b04
statistics/