Resource

Id Histone_ChIP-seq/ENCSR256YSLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR256YSL [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me2"]
Description
Labels
  • accession: ENCSR256YSL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 6 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:19.126805+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR256YSL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 6 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K4me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR256YSL float

Histone_ChIP-seq_ENCSR256YSL
Histone_ChIP-seq ENCSR256YSL [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me2"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR256YSL [1.41, 34.7]
n
223,308,487
mean
10
sd
5.39

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2233084876.94% 168612
chr1 20968534 8.42% 15555
chr1_KI270706v1_random 788 0.45% 3
chr1_KI270712v1_random 2414 1.37% 5
chr1_KI270713v1_random 9153 22.46% 9
chr1_KI270714v1_random 1108 2.66% 1
chr2 17271072 7.13% 13491
chr3 11966150 6.03% 9782
chr3_GL000221v1_random 3903 2.51% 7
chr4 8122129 4.27% 6736
chr4_GL000008v2_random 423 0.20% 1
chr5 10837693 5.97% 8530
chr6 11092580 6.49% 8816
chr7 11003416 6.91% 8736
chr8 10209520 7.03% 7742
chr9 9894990 7.15% 7281
chr9_KI270719v1_random 369 0.21% 1
chr10 11545456 8.63% 8770
chr11 11064839 8.19% 8009
chr11_KI270721v1_random 1703 1.70% 4
chr12 9997301 7.50% 7433
chr13 4942268 4.32% 4226
chr14 7439377 6.95% 5328
chr14_GL000009v2_random 1134 0.56% 2
chr14_GL000194v1_random 2570 1.34% 3
chr14_GL000225v1_random 1362 0.64% 2
chr14_KI270723v1_random 1228 3.22% 2
chr14_KI270724v1_random 699 1.77% 2
chr14_KI270726v1_random 3511 8.03% 7
chr15 7398015 7.25% 5625
chr15_KI270727v1_random 3522 0.79% 6
chr16 9830051 10.88% 6883
chr16_KI270728v1_random 2238 0.12% 3
chr17 12857982 15.44% 8442
chr17_GL000205v2_random 16660 8.98% 13
chr17_KI270729v1_random 553 0.20% 2
chr18 4467700 5.56% 3682
chr19 9713175 16.57% 6548
chr20 7617953 11.82% 5659
chr21 3377542 7.23% 2425
chr22 6949364 13.67% 4509
chr22_KI270731v1_random 2283 1.51% 6
chr22_KI270733v1_random 5374 2.99% 7
chr22_KI270734v1_random 1465 0.89% 3
chrUn_GL000195v1 4403 2.41% 8
chrUn_GL000214v1 2073 1.51% 4
chrUn_GL000216v2 1981 1.12% 3
chrUn_GL000218v1 384 0.24% 1
chrUn_GL000219v1 10362 5.78% 11
chrUn_GL000220v1 1264 0.78% 3
chrUn_GL000224v1 677 0.38% 1
chrUn_KI270438v1 588 0.52% 2
chrUn_KI270442v1 1559 0.40% 3
chrUn_KI270519v1 1360 0.98% 2
chrUn_KI270742v1 281 0.15% 1
chrUn_KI270744v1 5037 2.99% 5
chrUn_KI270751v1 1155 0.77% 2
chrUn_KI270753v1 2869 4.56% 3
chrUn_KI270755v1 250 0.68% 1
chrX 4639856 2.97% 4256
chrY 4821 0.01% 9
3306 contigs with no values (121565111 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 168612 250 50806 1324.39 765
global segment-length histogram

Files

Filename Size md5
ENCFF949GGJ.bed.gz 3.65 MB 9870197a99e45dcb72192dc11c97f2ea
ENCFF949GGJ.tabix.bed.gz 1.69 MB 2d058a037fb67ecf4c0d3bc61df445fd
ENCFF949GGJ.tabix.bed.gz.tbi 387.05 KB e65fb719ad97777656aee22ed28dc158
genomic_resource.yaml 3.11 KB 1f020e54adea6f31218e10f9e83b320f
statistics/